Lepeophtheirus salmonis (salmon louse): 121123155
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Entry
121123155 CDS
T08214
Name
(RefSeq) PHD finger protein 7-like isoform X1
KO
K22371
G2/M phase-specific E3 ubiquitin-protein ligase [EC:
2.3.2.26
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsm04121
]
121123155
Enzymes [BR:
lsm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121123155
Ubiquitin system [BR:
lsm04121
]
Ubiquitin ligases (E3)
HECT type E3
121123155
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
121123155
NCBI-ProteinID:
XP_040574206
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Position
8:5488604..5491165
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AA seq
525 aa
AA seq
DB search
MSVRRRLIRENLSEILDGDVCCMFCRNGVNPELGALYEHVNASLGSGDTFLVHYFCLLFS
SGLSQTDDEHLGIEGFLLPDIYNEWKRAKRLKCSHCLKTSASVGCVISNCSKSFHLPCAI
KQDVLLVFKDTFSTYCKNHHPKQKIPIGAEKGSKECSICLQPLDTHSKPLWSPCCSSWAH
KQCLSSYAASAGYFFKCPLCNDSDVFCDEMKSFGVHVPERDASWETEPHAFEELDERYGH
CDVKGRCLCPQGRKYDVDYSEWEIILCRICGASGVHFKCGKLIASASKKELPKWTCELCH
NVEKKLPVHHFHPVQRKAKNKSKRLASLLKTISFRVSDSNEESILSLKMDSNHSISLSKS
KKENIPSQVTCLLHLDRNNEHSRSEPSSSRKTTSFSSLIVPILSKIMTKQATSTSKLSNS
SRDKRKKLKRKLDENEENEDVNINVGGKTSKTNPNDFPFKRKSSSPSTATPLEPTIRRTD
QPALKRRKIQISPSSNKVKKIPFIDPNQRFISNFFYKIPKIPNSK
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtccgttagaaggaggctcattagagagaacttgagcgaaatcctggatggagatgtg
tgctgcatgttttgccgtaatggagtgaatcctgaattgggcgctctctatgagcatgtg
aatgcaagtcttggatccggtgatacctttcttgttcattacttttgtctcctcttttct
tctggactcagtcaaacggatgatgaacatctcgggattgaaggattcctcctaccggac
atatacaatgagtggaagcgtgcgaagcggctcaaatgttcccattgtcttaaaacctcg
gcttcagttggttgtgtcatttccaattgctccaaatcctttcacttgccctgtgctatc
aaacaagatgttcttctcgtcttcaaagatacttttagtacatactgtaaaaaccatcac
cccaaacaaaaaatcccgatcggcgcggaaaaaggatccaaggagtgctctatttgcctt
caacccctagacactcattccaagcccctttggtctccatgttgtagctcatgggctcat
aaacaatgtcttagttcttatgcagcctctgcgggctatttcttcaagtgtcccctttgt
aatgactctgacgttttttgtgatgagatgaagtcctttggagtccacgttcctgaacga
gatgcctcctgggaaacagagcctcacgcttttgaagaactcgatgaacgatatggacat
tgtgacgtcaaaggaaggtgtctttgtcctcaagggcggaaatatgacgttgactactcg
gagtgggaaatcattctctgtcgtatctgtggtgcatctggtgtgcattttaaatgcgga
aaactaattgcatctgcctcaaaaaaagaattgcctaaatggacttgtgaattgtgtcat
aatgttgagaaaaagcttccagtacatcacttccatccagttcaaaggaaggccaaaaat
aaatcgaaaagactcgcatctcttctaaagactatatcctttcgagtcagtgattcaaat
gaggagtccattttgtcattaaaaatggactccaatcacagcatttcgctgtcgaagagt
aaaaaggagaacattccttcacaagttacctgtctccttcaccttgatcgaaataatgaa
cactctagatcagagcctagttcatcaaggaagactacttctttctcaagccttattgtt
cctattttatccaaaataatgactaaacaagccacatcgactagcaaattatcaaattcc
tcaagagataaacgaaaaaaactcaagcgaaaattagatgaaaatgaggagaatgaagat
gtgaatataaatgttggaggaaaaacctccaagactaatcccaacgattttccatttaag
cgaaagtcgtcttctccatcaactgcaactcctcttgaacctactataagaagaaccgat
caacccgctctcaaaagaagaaagattcaaatatctcctagctctaataaagtcaaaaag
attccttttattgacccgaatcaaaggtttatcagtaattttttttacaaaattccgaaa
attcctaattctaaataa
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