Lepeophtheirus salmonis (salmon louse): 121123163
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Entry
121123163 CDS
T08214
Symbol
LSm1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121123163 (LSm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121123163 (LSm1)
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121123163 (LSm1)
mRNA degradation factors
5'-3' decay
Lsm complex
121123163 (LSm1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
121123163
NCBI-ProteinID:
XP_040574214
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All DBs
Position
8:complement(3366535..3367897)
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AA seq
138 aa
AA seq
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MSDHYLPGTASIMEELDKKLMVLLRDGRTLIGILRSVDQYANLVLHRAIERIHVGNDYGD
IPRGIFVVRGENVVLLGEIDEVRESEANSKLREVSLEEILEAQTKQQFEREEENRIRARA
FKKRGLTNTAEISMDDFM
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaccactatctaccagggacagcctctataatggaggaattggacaagaaattg
atggtgctccttcgtgatggacgtacactcataggtattctccgatccgtggatcagtat
gcgaatctcgtactccatcgagccattgaaaggattcatgtaggaaacgactacggagat
attccgagaggtatctttgtagttcgtggagagaatgtggttctattaggcgaaatcgac
gaagtacgagaatcggaggcaaattccaagctccgtgaggtatccttagaagagatactt
gaggctcaaaccaaacagcaatttgagagagaagaggagaatcgtattcgggccagggct
tttaagaaaaggggactaacaaatactgcagagatctcaatggacgattttatgtaa
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