Lepeophtheirus salmonis (salmon louse): 121123417
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Entry
121123417 CDS
T08214
Symbol
scat
Name
(RefSeq) vacuolar protein sorting-associated protein 54
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsm01009
]
121123417 (scat)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121123417 (scat)
Protein phosphatases and associated proteins [BR:
lsm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121123417 (scat)
Membrane trafficking [BR:
lsm04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
121123417 (scat)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Snf7
Sigma54_CBD
SocA_Panacea
COMP
SMAP
Motif
Other DBs
NCBI-GeneID:
121123417
NCBI-ProteinID:
XP_040574473
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Position
8:7025097..7028677
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AA seq
846 aa
AA seq
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MKSSGKEHKWSPIDCGQNLPAVLNDPKKGKQKDFFTRSWGDSFVDTAPIPSSPYLYQLSE
HAFTRYIRRVRKHLRPNARAKTPSLLNGTQASTPKKVIPPLSGIPKFFLDENFDLMKPEV
FSYIFPFLMKSSKGNQNGMELSGFSSQSREVQECVTQHLDVVEINLGHHLAQKYHHFFQV
MSYQDALMSQLKVLIKVVKELREDLRELYEPMNLSLKVSQLLRRKNNYERIQNRLNSMSF
LHQTQPTIQLLLSNSEFSGALDLIRTSKDILRVELKGVVSFRHLFSQLDEIQVMISKILV
SDFRGIIVTEVEKHTFLKRATCLDDLNEDNEDLNEGKLFSVIYGLLRLNSYTFLEELEES
CANAVKNIIAKCVSVLPHSKDQASTTSYRVGEFARIATPEGWTDLFDMLLGSLIVLLRRV
KLVQRIILTAIIKVNDLTDSSPLSLQCENNYTCQTQSLEDSSSQVLMNVCDLINERCATL
LALRSKSEAISLMTLNELKTIEKLIFILNNEMKTLSFGNSGNCLYLTLLSQFLQFIQCFD
ERQREKITQIVTKEKWVKSVFDICELVDKCSQFPRFVSFFKTENTSNGHCISYKDEELSY
DILESALAFLYIVIDYHMLSIELPVVKRELGFKLVDILCFYNSRICQYIIGLAALKFMTL
PKISFINLYLTFNSIDFISRFIPILASEFEDTSNEHKKISESLSRQFDNAMNRYSDHKQE
IVEKIIETLDDMQSKEFSAWTWDSKKSVPSQNFKKICRNINTFHETANSFLPKCILIQIM
KKVHINFCRVVRNEIKRKQRKSPKVDRISRDLLSEMVYYGQSLLRITDIIPQHEASNDYF
EKNLWD
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcatcgggaaaggagcacaagtggagtcccatcgactgcggacaaaatcttcct
gctgttttaaatgatccgaagaaaggaaagcaaaaggatttcttcactcgaagctggggc
gactcctttgtagatacagctccaattccttcatctccttatttatatcaattatccgag
catgcctttactaggtatattcgtcgagtccgaaagcatttgcggcctaatgcaagagct
aaaaccccgtccctcctcaatggaacacaggcttctactccaaaaaaggttattcctcct
ttatctggtattccgaagtttttcttagatgagaactttgatcttatgaaacccgaggta
ttttcctacattttcccattccttatgaagagttcaaaaggaaatcaaaatggaatggag
ctctccggtttttctagtcagtctagagaggttcaagaatgtgtcactcagcatttagac
gttgtggaaattaatttaggtcatcatttagcacagaagtatcatcatttctttcaagtc
atgtcctaccaggatgctctcatgtcccagctaaaagttttaattaaggttgtgaaggag
ctgagagaggatttgagagagctctatgaacccatgaacctctctctcaaggtatcccag
cttcttcgtcggaaaaataattatgaacgaatacaaaataggctaaattctatgtctttt
cttcatcaaactcagcctactattcaattacttctctcgaactctgagttctcgggtgca
ttggatttaattcgaacttccaaagatattttacgggttgaactcaaaggtgttgtttca
ttccgtcatttgttctctcaattggatgagattcaagttatgatcagcaaaatcctggta
tcagactttaggggaataattgttacggaagttgaaaaacacacttttttgaaaagagca
acgtgtctggacgacttgaatgaagataacgaggatttaaatgaggggaaattgttttct
gttatttatggtttattacgtctgaattcttataccttcttagaggaattggaagagtct
tgtgctaatgctgtgaagaatattattgcgaaatgcgtatcggttctacctcactccaag
gatcaagcatccacaacttcatatagagtcggggagtttgcacgaattgcaacccccgag
ggttggacagatctttttgacatgcttttgggctcactcattgttttgctaaggagagta
aaacttgttcaacggattatacttactgccattataaaggtcaatgatctgacagactca
tctcccttatcattacagtgtgaaaataactacacatgtcaaactcagtctttagaggat
tctagtagtcaagtactcatgaatgtttgtgacttaataaacgaacgatgtgctacgtta
cttgctctacgctccaagtctgaagccatctctttgatgaccctcaatgagcttaagacc
attgaaaaattaatattcattctgaacaatgagatgaagacactctcttttgggaactca
gggaactgtctctaccttactcttctaagtcaattcctgcaattcattcagtgctttgat
gagcgtcagcgcgaaaaaataacgcaaatcgtgactaaagagaaatgggttaaatctgtt
tttgatatttgcgaactcgtagacaaatgctctcagtttcctagatttgtttcattcttt
aaaaccgaaaatacttcaaatggtcattgcatatcctacaaagatgaagagctttcttac
gacattctggagagtgccttagcctttttatacatagtgattgattaccatatgctcagc
atagaactccccgtagtaaaaagagaattaggtttcaaattagttgacattttgtgcttt
tacaactcaagaatatgtcagtacatcattggtctagccgccttaaagttcatgactctt
ccaaaaatatcatttatcaatttatatctaacctttaactctatagattttatatctaga
ttcatacctatcttggccagtgaatttgaggatacttccaatgagcataaaaagatttct
gaaagtttaagtcggcaatttgataatgcaatgaataggtactcggatcacaaacaggaa
attgttgaaaaaattatcgagacattagatgatatgcagagcaaggaattttcagcttgg
acttgggacagtaaaaaatcagttcctagtcagaacttcaaaaaaatatgccgtaacatc
aacacgtttcatgaaacagctaattcatttcttcctaaatgtattttgattcagattatg
aaaaaagtacacattaacttttgtagagtcgttcgtaacgaaataaagcggaagcaaaga
aagtcccctaaagtagatcggatttcaagagatcttctctcagaaatggtgtactatggc
caaagtcttttaagaatcacggatataattcctcaacacgaagctagtaatgattatttt
gagaaaaatttatgggattaa
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