Lepeophtheirus salmonis (salmon louse): 121123553
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Entry
121123553 CDS
T08214
Name
(RefSeq) tonsoku-like protein isoform X1
KO
K09257
NF-kappa-B inhibitor-like protein 2
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsm03000
]
121123553
03400 DNA repair and recombination proteins [BR:
lsm03400
]
121123553
Transcription factors [BR:
lsm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
121123553
DNA repair and recombination proteins [BR:
lsm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121123553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_5
Ank_3
LRR_8
LRR_4
LRR_6
TPR_12
LRR_At5g56370
ANK_LRRK2
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
121123553
NCBI-ProteinID:
XP_040574611
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All DBs
Position
8:2414595..2419031
Genome browser
AA seq
1330 aa
AA seq
DB search
MPSIKKLRRLKEKGAGSEESERDLVLQLGQELLSEGRFEEALVEFEELEELSKEKNHELH
TFACRKAGETLEKLNNYEEAFKKIQKYHDLSVGDPIEYQRALTTLGGHFLSKSEYLVYDI
ESQFTFDSPEICDYLIKADDYCRRAENSIQDVLDPNVSNKEKEEMRSAIYANRFQIYYLH
KRFESSEDFFHKAEKIMLSYKFWDRLISLYEIRSTLEHKSGKLENALLYIDQAMKVTGFN
SRKEFILRDKAIILVDLRSFDKAQHVLIDAYKSANRDFRDSIKSILKCVCKILTILDQNE
NVYEVKKLEHLGDICVSVYAYHAALWYYDTAVNRLDPESEDDRAVLSGLYTSLAMTYKDL
KMFNLASDFYMKELHLTKDVPEEAFKTLMALTITTELEGKSYKAIKSLFMEARSLAKNSG
NLLRELHCLNEFIQFNERRKEEDSDVTEIKGKFEDLMNENSLTPEDITEAVEEKNEEEEE
EDEFDIDDLIYRIDCNNKRAKRKGSLKKDLKGETELHRKVKVPGNEREVARLIAQSGCVD
IEDNANFTPLHEACNHGQLEYVRMLVSAGADVNKESRKGTSPLISAALNGYVDIIEYLLD
EGAKPYHQDNDGWSCLDHLKMTDSDSEDVHFKKLCSRLSRAIQTKVASGLRLDPKREESS
GLIIVCQDSDEEDAPRNNYSSFNKQHSSLRSMKVNEKITKYGERNSVMTNEFSKRNHKEI
FSSRGATDYRKAIASLGCSGASGSGSIINPSSSSVMSKAEKIYSKNVISEKEYKFVNSLD
KDEWLEEDITPKRKKINHRGDEPIPKKSRQVENNGFFTRKKLVDKTERSSHFLPSSTLSR
TSGSSSSSSSLNKPLPTSVPPHFNCAVKPLHQSTISNSIMSSMKNLEVRKVKVKVYEKMF
LIPIPNKNLNAEWLANEASKRYHSSTGQRLLLKLTTEDGAEIYAEDPLCSIIGPNMEQFI
AVTTQLNSSISLEKFYAKRCKELNRNRHKPLLDALISAINTGSFSLPEKIPFHMDDLEPI
LETLNYGMSSKLKELSIPYNHLSTLNFQSAFFSLTGLKKLNLSKCELQGHHLKDSLPQLP
ILKELDVSYNDLGDEALNEALDQFSSVTALNINKCGLSKDFELPSSIRDNLVKLSISGNT
LSRHGIEEIVRSLNPSVLHYLDISYCGSFESIEKLLVLLSKGQSQECPLEYLDVSGLDLK
GTICSPNVLDRFTHLKSLKLSGNMNITMNSLQKLLEGLYIHNIPLEALEAVDIFSLFSDE
DPNEHLGLVKIFERLVSNKSLKCLKLHMEEEDYLDSLVQDLSKIWRNNHGPNSKVELKNQ
VLTLETINSL
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atgcctagtattaaaaaacttcgccgacttaaagagaagggagctggatccgaagaatcg
gagagggatctcgttcttcaattgggacaagaacttctatccgagggacgctttgaagaa
gcacttgttgaatttgaagaactcgaggaactctccaaggagaagaaccatgaacttcac
acttttgcatgtcgaaaggcgggagagaccttggagaaactcaacaactatgaagaggcc
tttaaaaagattcagaagtaccatgatttgtccgtgggtgatccgattgagtatcaaaga
gccttaacaacacttgggggacattttctctccaaatcagagtatctagtatatgatatt
gaatcccaatttacgtttgattctccagagatatgcgattaccttattaaggctgacgat
tactgccgacgtgctgaaaactccatccaggatgttcttgatccaaatgtatcgaataaa
gagaaagaagagatgagatcagctatatatgctaatcgatttcaaatatattaccttcac
aaacgctttgaatcctcagaagatttctttcataaggctgaaaaaatcatgttatcatac
aagttctgggatcgactcataagtctctatgaaattcgatccactctggaacataagtct
ggtaaacttgagaatgccttattatatattgatcaagcaatgaaggtcactggatttaac
tcccgaaaggaatttattcttcgtgacaaggctataattttagtggacctaagatccttt
gacaaggcgcaacatgtattaattgatgcatataaatccgccaatcgagattttcgtgac
tcaattaaatccattcttaaatgtgtttgtaaaatccttacaatattagatcagaatgaa
aacgtgtatgaagtaaagaaacttgagcatctgggagatatttgtgttagtgtttatgct
tatcatgcagctctatggtattatgatactgcagtaaatcgtttagaccctgagtctgag
gatgatagagctgtactctctggactctatacctctttggccatgacttataaggatctg
aaaatgtttaatttagcctcagatttttacatgaaagagttgcatctcacgaaagacgtt
cctgaagaggcttttaaaacccttatggcccttacaatcacaacagagcttgaagggaaa
tcttacaaggctatcaagtcactcttcatggaagctcggtctttagctaaaaattcagga
aatttattgagggaacttcactgtttaaatgagtttattcagtttaatgaacgaagaaag
gaagaggattcagatgtaacggaaataaaagggaagtttgaggatctaatgaatgaaaat
agtttaaccccagaggatataactgaagcagtagaggaaaagaatgaagaggaggaggag
gaggatgaatttgacatagatgatctcatttacagaatagattgcaataacaaaagggct
aaacgaaaaggatcattgaaaaaagatttaaaaggagaaacggagctccataggaaagtc
aaggttcctggaaatgaaagggaggtagctcgcttgattgcccaatctgggtgcgttgat
atcgaagacaatgctaattttactccactgcatgaggcatgtaatcatggacaactcgag
tatgtcaggatgttagtgtcggctggagctgatgtgaacaaagagagtcgcaaaggaact
tcaccgctcatttctgctgctcttaatggctatgtggatataatagagtatttattagat
gaaggagcaaaaccttaccatcaagataatgatggttggtcatgtttagaccacttaaaa
atgacggattcggattcagaggatgttcactttaaaaagttgtgttcacgtttaagtaga
gctatccaaaccaaagttgcttccggacttagactggatccgaaaagagaagaatcttct
ggtctcataattgtatgtcaagattcagatgaagaggatgctcctcgcaataactattca
tccttcaataagcaacactcctctctcagaagcatgaaagtaaatgaaaagattaccaag
tatggggaaaggaactctgtcatgacaaatgagttttctaaaaggaatcacaaggaaatt
ttttcttctagaggagctactgattatcgtaaggcaatagcttccttaggatgcagtggt
gcctcaggatcggggtccatcattaatccatcttcaagctcagtcatgtcaaaagctgaa
aaaatatattccaaaaatgtaatttctgagaaggaatataaatttgttaattcactagac
aaggatgaatggctggaagaggatattactcccaagagaaagaaaattaaccacaggggg
gatgagcctatacccaaaaaatctcgtcaagttgaaaataatggtttttttacaaggaaa
aaattagttgacaaaaccgagcgatcgtctcattttcttccaagttccacacttagcaga
acaagtggttcttcttcttcctcatcatcactgaataagcccttaccaacttcggtaccc
ccacattttaattgtgcagttaagcctctccatcaatcaactatatcaaattcaattatg
tcatccatgaaaaatcttgaagtcaggaaagtgaaagttaaagtgtacgaaaaaatgttt
ttgattccaatacccaataagaatctaaatgctgaatggttagcaaatgaggcttccaaa
agatatcatagttcgactggacaacgactcctcctcaaattaactacagaggatggagca
gaaatatatgctgaagatcctctttgttccataattggtccgaacatggagcaatttata
gcagtcacgacgcaattaaattcttcaatttcattagaaaagttttatgctaagcgttgc
aaggagttaaatagaaatcgacataagcctcttttagatgcactcatctccgccataaat
actggttcattttctcttccagagaaaattcctttccatatggatgacttagaacctatt
ttagagacactgaactatggaatgtcctcaaagctcaaagagctctccattccatacaac
catttgtctacattaaactttcaatccgccttttttagtcttacagggctgaaaaaactc
aatctttccaaatgtgaactacaagggcatcatttaaaggactcccttccacagttaccc
attcttaaagaattggatgtaagttataatgatttgggagatgaagctctcaatgaagca
ttagatcaattttcttccgttaccgctttgaatattaataaatgtggactttccaaagat
tttgaattaccctcatctataagagacaacttagttaaattgagcatatcgggaaacacg
ttatccaggcatggtatagaagaaattgttcgctccttgaatccctctgttctccattac
cttgatatttcctactgtgggtcatttgagagtatcgaaaaacttttagttttgctatcc
aaaggacaatctcaagaatgtccactagagtatctagatgtttcaggtctagatcttaag
ggtacaatatgtagccctaacgtgcttgatagatttactcatttaaagagtttaaagtta
tctgggaatatgaacattacgatgaactctctacaaaaattattggaagggctatatatt
cataatattcctctagaagcacttgaggcagtggacattttttcattattcagtgatgaa
gatcccaatgagcatttgggactagtcaaaatcttcgaacgtttagtgtccaataaaagt
ttaaaatgtttaaaattacatatggaggaagaagattacttagattccctcgttcaagat
ttatcaaaaatctggaggaataaccatgggcccaactccaaggtggaactgaaaaatcaa
gttctcacacttgaaacaataaatagtctatga
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