Lepeophtheirus salmonis (salmon louse): 121123702
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Entry
121123702 CDS
T08214
Symbol
shtd
Name
(RefSeq) LOW QUALITY PROTEIN: anaphase-promoting complex subunit 1
KO
K03348
anaphase-promoting complex subunit 1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121123702 (shtd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsm04121
]
121123702 (shtd)
03036 Chromosome and associated proteins [BR:
lsm03036
]
121123702 (shtd)
Ubiquitin system [BR:
lsm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
121123702 (shtd)
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
121123702 (shtd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Apc1_MidN
APC1_3rd
APC1_C
ANAPC1
PC_rep
Motif
Other DBs
NCBI-GeneID:
121123702
NCBI-ProteinID:
XP_040574760
LinkDB
All DBs
Position
8:complement(37643253..37650167)
Genome browser
AA seq
1960 aa
AA seq
DB search
MVYVKETKEFIPAGRIALRSHPGKTSVFNGQPSTPWMPPGMEMEEDENKEIVDEKEEWTL
MGRDNALMELYTKGNTVVWSQHPHVIKSYTGEGEVKQALWFVFHEYPKCPSIINSCNLNR
HPMEDSTFTPVRSFCKQKEQQDYELGDPIPSIVIHESGTLKIFTEKGEDFSTALPIPIKK
CWPSKYGLLLERDCQGRQNLPVLFALLHPLGDITRIVMKERDKSVGPILSENQRIIFTSE
NPSICVIYDSLNDHHSVWKIRKATSSEGKVSSLRPSSTSSSFVMDAGTSQDSLSRSHSHT
NTSNSNTPINSHNNSILASTANGTSGRTNSHSPFSTLAAICRSPSTTAGGGGCLNTTFAS
RLMDCSNNIGHKSISFRMGDDFNQQLESLPPEVSLCLEHLWSEPKYSSLGSAATKIFISK
DVVERTYLNYLVPEFEELFVVRFDESNDGMLIFNIVQKISAVDAIFVESLNMTLILEPTS
STFSLILYSGVKKVSMFAFKSIYYSNIAYEISTLHLDSKPGTPTSRKILTSSRPPSATIF
NTPLIQPCYSPPSLSPIEVPQNRSINKCFVIQSLKDAVHDKVFLKFVNGLNVQITVPPMA
TTSLVRRCIAAIKTTLPREIALHFQVKWYAVRNSPGPASVSPSREWELFSRCLMGLMGYH
ADRIKDESRLMSPSSNEGSGGLSSSKKMRKEKSGSDGDWQHLLSSFQHREVGKRISNLLG
LEEVIPDNFCLSNERKTNSDEKCNLEEDGEKYVNSEASLFTFMPSILWSLHLLYENSKLD
MSHWEGMNFLACLLIRLSADLQMPYYVDHYWRDFPEICPIPTLGAATTGQLREDQLKKLQ
PLPQMTERPPCIYSHLRSILSREKLSPFPYISKVAKRTRDMIYCYAVYASPADQQIIKLD
DYIQVVNIPGNREEAVLEPISLTSKLWHGRVVDLLLVLEFDSLDSLPPGLSLPLRSAIFA
SHKDPSNWPSNAYQLIGREDLALRDDTKAHVAKFNRENSGSSKKIAVLNQGSTSTDAVND
SNFEDGTETSESSISKLRWPNDRRLYEVRRLLQSARPVTVFLKQKPEMTDHEFVEEQEKH
LHSLCVRTMALPVGRGALTLRTSVPIITEPLSIPKLCLTGRAPPRGATIEMEHIDVAPNE
ERWPTFHNGVAAGLQMRPDDIDSQIDSAWITFNKPKESSQSGSSTANNNNNNANNSSNSN
NLVEHSGFLMALGLNGHLSKLGKLELYDYLINGNEMVSIGILLGISAAKRGTMDVLATKK
VSTQLEALLPATATELPISHATQVAGLVGLGLLYQGTGHHHMAEVCLGELGRPPGPELEN
CTDRESYSLAAGLALGMITLGRGNSLSNSCLSDLDLPDTLYHHMVGGSRSAIHQRYIYRS
PSYQIQEGDSINIDVTSPGATLALGMMFFRSGNETIAEWMSIPKTQFLLEFVRPDFLMLR
TLAKGLIMWDRIIPSKKWIESHVPDSIKPHCLVRPPDNSPSGIDYETINQAYCNIISGAA
LVMGLRFAGSCNAQAFEVLHDITRRLIAISKRSVAELAGKATIEQTICVHVLAMSIIMAG
SGEIKIIRIVRYLRSRTGNTNSTVTYGSHMALHMALGLLFIGGGRYTLSTKPEAVAAMLC
AFFPKFPTHSNDNRYHLQALRHLYVLAAEPRLIVPTDVETNSLSFCHIEITYMDTAWYKC
HNLKLKAPCMLPELRYLSSVSICDDRYHPVHFDLAKGTESLKKVLEQRYGQVYIKRRAGC
VGYIEDPHGFRSLIAQCLTRDPSFKWDVSSRLLDNFSNVPGVSNFHDIFLKSSSTNEGDK
MKNIMGTLLYECACKEKLNFLPVWMDFFSNLESLGKSSEACRFAPEQLSLFTTFAEYHRP
ECSLLSKEMATSVLQNLNKTMDSWKSELRVMLRAYLTGNFNCTEDTDRLKKLTSFLIISN
LPVVIQSSSDLPKSPKINPLEWLGSMKGSNAHNIYLHISD
NT seq
5883 nt
NT seq
+upstream
nt +downstream
nt
atggtatatgtgaaagaaaccaaggagtttatcccggctggaagaattgcactacggagt
catcctggaaaaacatctgtattcaatggacaaccttctacaccctggatgcctccgggg
atggagatggaagaggatgaaaataaagaaatagtcgatgagaaggaagaatggactctt
atgggcagggataatgccttgatggagctttacacaaaagggaataccgttgtgtggagt
cagcacccacatgttatcaagtcttacacgggtgaaggagaagtgaagcaagctctttgg
tttgttttccatgagtatcccaaatgtccctctattatcaattcctgcaacttaaatcgt
catccaatggaagattccacgtttactccagtgcgatccttctgtaaacaaaaggagcaa
caggattatgagttaggagatcccattccttccattgttattcatgaatcaggaacttta
aaaatattcaccgaaaaaggtgaagatttctcaacagctctacccatacctatcaaaaaa
tgttggccttctaaatatggtcttttgttggaaagagattgtcagggacgtcaaaacctt
cccgtattgtttgcattactccatcctttgggtgacattacgcgtattgttatgaaagaa
cgagataagtctgtgggcccaattttgtctgagaatcaacgaataatatttacttctgaa
aatccttctatatgcgttatatatgattcattgaatgatcatcactctgtgtggaagata
agaaaggccacttcttctgagggcaaagtgtcttctttacgtccttcttccacttcctcc
tcatttgtcatggatgctggtacgtcacaggatagtttatcacgatctcattcacatact
aatacaagcaatagtaatacaccaattaacagtcataacaattcaatacttgcttcaact
gctaatggtacatctggaagaaccaatagtcattctcccttttcaacattagcagccatt
tgtcgttcaccgagtactactgcagggggaggaggatgcctcaatactacgtttgcttct
cgtttaatggattgttctaacaacattggccataaaagtatttcatttcgaatgggggat
gattttaatcagcagttagagtctcttcctcctgaagtatctctctgtttggaacattta
tggagtgaacctaaatattcatctttgggaagtgctgctactaagatttttatttcaaaa
gatgttgtagaaaggacttatttgaattatttagttccagaatttgaagagcttttcgtt
gttcgttttgatgaaagcaatgatggaatgctcatttttaatattgtacagaagataagt
gcagttgacgcaatttttgtggagtcccttaatatgactcttatacttgagcctacatcc
tctactttttctcttatactctattctggggtgaaaaaggttagcatgtttgctttcaaa
tcaatctattattccaatatcgcgtatgaaatttcaactcttcatttggattctaaacct
ggaactcctacatctcgtaagattcttacatcgagtcggccaccctctgctacaattttt
aatacaccattaattcaaccatgttattctcctccttcactctcacccatagaagtacca
caaaatcgttcaataaataaatgctttgttatccaatctcttaaagacgcagttcatgat
aaagtttttctcaaatttgtcaatggtcttaatgttcaaattactgtaccaccaatggca
accacatcattggtaagacgatgtattgcagccattaagacaactctacctcgtgaaatc
gctcttcattttcaagttaagtggtatgcagttcgtaattcacctggtcccgcttctgtt
agcccttcaagagagtgggaacttttttctagatgtctcatgggtttaatgggatatcat
gcggatagaatcaaggatgagtctagattaatgtctccttcctcaaatgaaggaagtggt
ggcttatcctcatcaaagaaaatgcgaaaagaaaaaagtgggtctgacggagattggcaa
catcttttatcttcttttcaacacagagaagttggtaaaaggatctcaaatcttcttggt
cttgaggaagttataccagataacttttgtctttcgaatgaacgtaaaacaaactctgat
gaaaagtgtaatttggaggaagatggggaaaagtatgttaactcggaagcaagtctgttt
acattcatgccttccattttgtggtcattacatcttctctatgaaaattcaaaacttgat
atgtcacattgggaaggcatgaactttttggcgtgcttgctcattcgtctatctgctgat
ctacaaatgccttattatgttgatcactattggagagatttcccggaaatttgtcccatc
ccgactctcggtgctgctactaccggccaattaagagaagaccaattgaaaaagttgcaa
cctcttcctcaaatgaccgaaaggccgccttgcatttatagtcatttaagaagtatactt
tctcgcgaaaaattatcaccttttccttacatttccaaagttgctaagcgaactcgagac
atgatatattgttacgctgtttacgcatctcctgcagatcagcaaataattaaattggat
gattatattcaagtagtcaatatacccggaaatagagaagaagctgttctcgagcccatt
tccttaacatcaaaactctggcacggacgcgtagtagatcttctattggtattagaattt
gattctttagattccttgcctcctggattgtcccttccacttcgctcagcaatatttgct
tcacataaagatccttcaaactggccttccaatgcttatcaattgattggaagggaggat
ctagctttaagagatgatacaaaagctcatgtagcaaaatttaatcgagaaaattcaggt
tcttccaaaaagatagctgtattaaatcaaggttccacttcaacggatgcagttaatgat
tctaattttgaagatggaactgagacatccgaaagttcaatatcaaagttaagatggcct
aatgatcgtcgactgtatgaagttcgtcgtttgcttcaatccgcgagaccagttacagtt
tttctaaaacaaaaaccagaaatgacggatcatgaattcgttgaagaacaagaaaaacat
ctccattctctttgtgttagaacaatggctttgcctgtcggccgtggtgctttaacttta
agaacctctgttcctataatcacagaacccctgtctattcctaaactttgtcttactggt
agggctcctccaagaggcgcaactattgaaatggaacacattgatgtcgctcctaatgaa
gaaagatggccaacctttcacaatggtgtagctgcaggattgcaaatgcgtccagatgat
attgatagtcaaattgattctgcttggatcacttttaataaaccaaaggagtcctcccag
tctgggagttccactgccaataacaacaataataatgccaataatagttcaaattcaaat
aatttagttgaacattcaggattcttaatggcactgggtttaaatgggcatttatctaaa
ctgggaaaactcgaattgtatgattatttaataaatggtaatgaaatggtgtccataggt
attctcttgggtatatctgcagccaaaagaggaactatggatgttttagccactaaaaaa
gtttctactcaattggaggctcttctccctgcgacggctacagagcttcctatatcacat
gccacacaggttgctggattagttggacttggtcttctttatcagggtacagggcaccat
catatggctgaggtttgccttggggaattagggagaccacctggtcctgaattggaaaat
tgtactgatagagaaagttattctcttgctgctggcttagctcttggaatgataacttta
ggtcgtggtaactcactatcgaatagctgtctttctgatttagatttacccgatactctt
tatcatcacatggtgggtggttcaagatctgcaattcatcagcgctatatatatcggtcg
ccctcttatcaaattcaagaaggagattcgattaatattgacgttacaagtccaggagca
actcttgcccttggaatgatgttttttagatctggaaacgaaactattgcggaatggatg
tcaattccaaaaacacaatttcttctagaatttgtacgtcctgattttttaatgctcaga
actttggcgaaaggtctaataatgtgggatcgtatcattcctagtaaaaaatggatcgaa
tctcatgtcccagattctattaaaccccattgtttagtccgtcctccagataactctcct
tcaggaatagattatgaaactataaaccaagcttattgtaatattatatctggcgctgca
cttgttatgggcttacggttcgcggggtcctgcaatgctcaagccttcgaggttcttcat
gacattactcgtcgattaattgcaatatcgaaaagatcagtcgctgaattagcaggaaaa
gcaacaatcgaacagacaatatgtgttcatgtattagctatgtcaatcatcatggctgga
tctggtgaaattaaaatcatccgcattgtcaggtatctaagatctagaactggtaatact
aattctactgttacctatggttcccatatggcgttacatatggcgctgggattacttttc
attggtggaggacgttatactctatccactaagccagaagctgttgctgctatgctttgt
gcctttttcccgaaatttcctacacattcgaacgataatcgatatcatcttcaggcactg
agacatttatatgttttggcagctgagcctcgtttgatagttcccacggatgtagaaacc
aattcgctctcattctgtcatattgaaataacttatatggatacagcctggtacaaatgt
cataatcttaagttaaaggctccatgcatgcttcctgaacttcgttatcttagttcagta
tctatctgtgacgatcgttatcatccagtacattttgatttggctaaaggaacagaatct
cttaaaaaagttttagaacaacgatatggccaagtttatattaaaagaagagcaggatgt
gttggatacattgaagatcctcatggatttcgttcgttaattgcacaatgtctcactcgg
gacccttcctttaagtgggatgttagctcacgtttgttggataatttttctaatgtacct
ggtgtgagtaatttccatgacatatttcttaaatcctctagtactaatgaaggcgataag
atgaaaaacattatgggaacattgctttatgaatgtgcttgtaaagaaaagttaaacttt
ttacctgtttggatggactttttctcgaatttagaatcattgggaaaaagtagtgaagct
tgcagatttgcacctgaacaattatccttgttcacaacttttgctgaatatcatcgacct
gaatgcagtttgctatccaaggaaatggcaacatccgttctccaaaatcttaataagacc
atggattcatggaagtcagagctaagggttatgctgagagcttatctaactggaaatttc
aattgtactgaggatacagatcgcttaaaaaaactgacatcgtttttaattattagtaat
ctccctgttgttattcaatcttcttctgatttacctaaaagtcccaaaattaatcccctt
gaatggttaggatcaatgaaaggctctaatgctcataatatctatctacatatttctgat
taa
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