Lepeophtheirus salmonis (salmon louse): 121123748
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Entry
121123748 CDS
T08214
Name
(RefSeq) F-actin-uncapping protein LRRC16A isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121123748
Membrane trafficking [BR:
lsm04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
121123748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
LRR_4
DUF445
Motif
Other DBs
NCBI-GeneID:
121123748
NCBI-ProteinID:
XP_040574812
LinkDB
All DBs
Position
8:complement(6575330..6584637)
Genome browser
AA seq
1544 aa
AA seq
DB search
MNSGRRSMTRDINESIRLVLGKHIKILHKASAKYELKGGDKVENRVLVLSAHRIFVMTTK
VPTRIDQHFHYLELRHIESRRRNSMRWTSESTNKSHHFILEDADPLLCTLFNAVRNVFPG
VPVEHVLGPILLSPSDRLRDTLEFKPPDPKTLGPCGGFSSQYACMCDYFGLPFREEVAWD
VDTIYFSHDSRELRLQDFEHLDHRDLVCILSALEHNTWFTKLRASLSAGTASSSSSNSST
SGTKLAGDIAERILSVVGKSSSLQELYISGIGARYDFAQKLSGAITTNPRSAFMSFDLSC
NFLEDKGVAALSQSVSKLPRGLHHVNLSHCSLSSKGITAFASSLANHRFTASTLTYLNLC
GNSMKEAEASHALCSFLAQPNAVAILDISSTDTPLDILFNALVRGCTSSLTHLNLSRNPF
SSKKAKDVPEAFKQFFATTLSLQYVNLSHCKLPADALKNLLLGLVCNEATNNVELNLSNN
NLGANGAAVLENCIGGVRCLSRLDLSENNIEAEMAGVMNGLTRNKSILSLNISRNMTNVK
PKYLSAVMESIVHLLQDEDATLTKLNISDCKLKAEINNVINALGSNQCLQHLDIQGNGMG
DVGARLLAKALQINTRLKVIHLDRNNISLQGYSDITYALQSNYAMRHIPFPTYDMIPFMK
THPEKVDSILHRLQELLQRNSSPHQFRNAGQAFRLTQGFILSSTQQILDRVSAATQDNVE
AFRKTQVANEESDTESEIIVLRARGYLNDAEKSKHLLSALHEVSSARDEIDTKMRRVSED
LSSFVEDYVRKNLENMIMCAEKQCSQVMSNSDLRTSIRATCAKKCVISSDFVSNIISDQV
GLEIHNKINELNLIIANNISDRVIDEVIESMNGISKKILSEIGSKKKKRSLTPDVLKQGV
NHGMSSGLPSTRPSSSVDGSNDNLSDAPTNSSHGGGGGSITDIASTKSESSPIHTPQTNK
RKSLQDRKLRPKSVTDENNILRHTPDILSSNTIQEEDSVPELPSVSALQHLGKARPKRPK
KYAPSRGAIVTHHSSTSSVNAFASNDESFNDGFDKFFYSSSVNSVLSNLSPSSSPSGSPM
LEDVPRQGGSFSSVGSTSLIKEQYIDESNSSNKSPLPLHKSPTPTHSSKLSCLASSTLDE
DYLPTQPKNSPEKKSSGSSPSVHSITDIFARSKKKSSTESPSSPKLDPDSSSLPSKRPKS
SLVCEEPIDEFKSAPSSPPPPVPPADYEVGKKTPEEVARRHGVGLGGNMLAEMKAKQEKR
SSVIVPPVVSSSSSSSSSKEPSNNEEKNLFGKVKLRTTGLAGSLTSPTSEFVSDMHKSSY
DDQDERLKDLKCIPSSSPPVMGGGGSIVGLRASKFSASPPNVTSCALLTSTPTNTNNNLS
NDSVAAKPKPLPKPRPWSIVGVDRKSGELTSVTSGNKDSDSLEKNEEGPCTTTGVQQQGR
SYSTSIPKKNSVRDLINNMNKVESGSSSSSSTSTSSNQYENVRRKGNSLPRNSAPPTATT
SSSSSVGALDSGRSPNIIKKESTSDDPRILKLEDDFAFEDVMDV
NT seq
4635 nt
NT seq
+upstream
nt +downstream
nt
atgaattctggtcgtcgtagcatgactcgtgatataaacgaatcaatccgtcttgtgttg
gggaagcacatcaagatccttcacaaggccagcgccaaatatgagttgaagggcggcgat
aaagtggagaaccgtgttttggttctctctgcgcatcgcatctttgtgatgacaaccaaa
gtcccaacacggattgatcaacatttccactacttagaactgcgacacattgagtcccgt
cgtcgtaattccatgcgttggacctctgagtctactaacaaatcgcaccactttattttg
gaggatgcggacccccttttgtgcactcttttcaacgctgtcagaaacgttttcccaggt
gttcccgtggagcatgtccttggacccattcttctctcaccttcagatcgacttcgtgat
acacttgagttcaaaccacccgaccccaagactcttggaccctgtggaggcttttcttca
caatatgcttgcatgtgtgactattttggcttaccttttagggaagaggtggcatgggat
gtggacactatttatttctctcatgattccagagaactgcgattacaggactttgaacat
ttagaccatcgtgatcttgtgtgtatactttctgcccttgaacataatacttggtttacg
aaactacgtgcttcactttctgcgggtactgcatcttcatcctcttctaattcatccacg
tctgggaccaagcttgctggagatatcgcggaaagaattctaagtgtcgtgggaaagtct
tcatccttacaagaactatacatttcagggattggggcacgatatgactttgctcaaaaa
ttaagtggtgccatcactaccaatcctagatctgcatttatgtcatttgatctctcatgc
aactttctagaagataaaggcgttgctgcgctctcacaaagtgtatcaaaattaccaaga
ggtcttcatcacgttaatttaagtcactgctcactctcttcaaagggtattactgctttt
gcatcctcccttgccaatcatcgcttcactgcaagtactcttacctaccttaatctttgt
gggaattcaatgaaagaagcagaggcaagtcatgccctttgctcctttcttgctcaacca
aatgctgttgctatcttggacatctcgtccacggacacacctcttgatattctcttcaat
gcccttgttcgtggctgtacttcttctctcacacatctcaatttaagtcgcaatcctttt
agctcaaagaaagcaaaagatgtaccggaagcatttaaacaattttttgctacaacactt
agtttgcaatatgtcaacctcagccattgcaaattgcctgcagatgctctaaagaaccta
ttgctaggattggtctgcaacgaagctacaaataacgtagagctgaatctaagcaataat
aatttgggagcaaacggtgctgctgttctcgaaaactgcataggcggcgttcgttgtctt
tctcggcttgatttgagtgaaaataacattgaagctgaaatggcaggcgttatgaacggt
cttacgcgtaataagtcaatcttaagtttgaatataagtcgaaatatgactaatgtgaag
cccaagtatttgtctgccgtgatggagtctattgttcatcttttacaagatgaagatgct
acgcttacaaagttgaatatttccgattgcaaattaaaggcagaaattaacaatgttatt
aatgccttgggatcaaatcaatgtcttcaacatttagatattcaaggaaatggtatgggg
gatgttggcgctcgtctacttgccaaagcccttcaaattaatactcgtctaaaagtcatt
catctagatagaaataatatctcacttcaagggtattcagacataacatatgcactgcaa
tcaaattatgctatgagacatatcccatttcctacatatgatatgattccctttatgaaa
actcatccagagaaggtcgactcaattcttcatcgtcttcaagaacttctacagcgaaat
tctagtccacatcaatttagaaatgccggtcaagcatttagacttacccaaggattcatt
cttagttctacacaacagatacttgatcgggtgtcagcagctactcaagacaatgttgaa
gcgtttaggaaaactcaagttgcaaatgaagaaagtgatacggagtcggaaatcattgtc
ttaagagcaagaggttatcttaatgatgcagaaaagtcgaaacacctattgtcagcccta
catgaggtttcctctgctagagacgaaattgatacgaagatgagacgtgtatctgaggac
ctatcttcatttgtggaggattatgttcgaaaaaatttggaaaatatgataatgtgtgca
gaaaagcagtgctcacaagttatgtcaaattcagatcttagaacgtctatccgagcaacc
tgtgctaaaaagtgcgtaatttcctcagattttgtatccaatataatatctgatcaagtg
ggattagaaattcataataagatcaatgaactaaatttgattatagccaataacatatct
gatcgtgtaattgacgaagtgatagaatctatgaatggaatatctaaaaagatattatct
gaaatcggatctaaaaagaaaaaacgctctttaacaccggatgttttaaagcagggtgtt
aatcacggaatgtcatcaggcttgccttcaactagaccttcatcttctgttgatggttct
aatgataatttgtctgatgcccctacaaatagtagtcacgggggaggaggtggaagtatt
acagatattgctagtacgaaatccgagtcttcgcccattcatactccacaaacgaataaa
cgtaaatcattacaagatcgtaaactccgacctaaatccgttactgatgaaaataatatt
cttcggcataccccggacatccttagttccaatacgatccaagaggaagattctgttcct
gaactcccttccgtatctgctcttcaacatttaggaaaagcgaggcccaaaagacctaaa
aaatacgctcctagtcgtggagcaattgttactcatcattcatccacatcttcagtcaat
gcatttgcttccaatgacgaatcttttaatgatggatttgacaagttcttttattcttct
tccgttaattcagttttatccaacttgtcaccatcatcatctcctagcggaagtccaatg
ttggaagatgttccaagacagggaggctcattttcatcggtaggatctacatctcttata
aaggaacaatacatagacgaatcaaattcgagtaataaatcccctcttcctctgcacaaa
agtccgacacctactcattcctctaaattgtcttgtttagcaagctcaactttagatgaa
gactacttgcccacacaaccaaagaactcccccgagaaaaagtcttcggggagctctcca
tctgtacatagcataacagatatatttgcacgttcaaagaaaaaatcatcaacagaatca
ccttcctctccaaagctggatcctgattcatcttcccttccctctaagcgtccaaaatct
tccttggtttgtgaagaacccattgatgaatttaaatcggccccatcctctccgccacct
ccggttcctccagcggattatgaagttggtaaaaagactcctgaggaagttgctcgacgc
catggagtcggacttggaggaaatatgttggcagaaatgaaagcaaagcaggaaaaacgt
tcttcagtcattgtcccacctgtagtatcgtcatcatctagttcttcatcgtcaaaagag
ccttctaataacgaagaaaaaaacttatttggaaaagttaaacttcgaacaacggggctt
gctggtagtttgacgtctcccacttccgaatttgtttctgacatgcataaatcttcatat
gacgatcaagatgaaagactaaaagacttaaagtgtatcccttcatcttctcctcctgtt
atgggaggcggaggttcaattgttggcttgcgagcttccaaattctctgcatctcctccc
aatgttacatcctgtgctctccttacatccactcccacaaataccaacaacaatttatca
aatgacagtgtcgcagcaaaacctaagccattgcccaagccacgtccctggtccattgtt
ggagttgatcggaaatctggtgaacttacatcagttacgtcaggaaataaagattctgat
tcacttgaaaaaaatgaggaaggaccttgtacgacgacaggggttcaacaacaaggacgc
tcttactcaacatcaatacccaaaaagaattctgtccgtgatttaattaataacatgaat
aaagttgaatcaggttcttcttcttcttcgtcaacttcaacctcctcgaatcaatatgaa
aatgttagaaggaaaggaaactctttacctcgaaatagtgctccacctactgccacaact
tcatcctcatcttctgttggtgcattagattccggaaggtcccctaatattattaaaaaa
gagtccactagtgacgaccctagaattttgaagttagaagacgattttgcatttgaagat
gttatggatgtttaa
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integrated database retrieval system
