Lepeophtheirus salmonis (salmon louse): 121123755
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Entry
121123755 CDS
T08214
Symbol
Rad23
Name
(RefSeq) UV excision repair protein RAD23 homolog A
KO
K10839
UV excision repair protein RAD23
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03420
Nucleotide excision repair
lsm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121123755 (Rad23)
09124 Replication and repair
03420 Nucleotide excision repair
121123755 (Rad23)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
lsm03051
]
121123755 (Rad23)
03400 DNA repair and recombination proteins [BR:
lsm03400
]
121123755 (Rad23)
Proteasome [BR:
lsm03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
121123755 (Rad23)
DNA repair and recombination proteins [BR:
lsm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
121123755 (Rad23)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
UBA_3
Crinkler
GIP1_N
UBA_2
Ubiquitin_4
UBA_9
DUF1421
CUE
OTU1_UBXL
DEC-1_N
Motif
Other DBs
NCBI-GeneID:
121123755
NCBI-ProteinID:
XP_040574822
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All DBs
Position
8:777559..779594
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AA seq
352 aa
AA seq
DB search
MHLTIKNLQQQTFQIEIESDKSVKDLKDKIESTKGSGDYPSSSQKLIYAGKIMLDGDPLN
SYDVDEKKFIVVMVTKKAAAAAAPTPAVAAALPPTPAAAPEPPKTEEPTGQVADKEPESS
KASEEKKEDEESSSETADCVMGEDYNKMVQNIVDMGYDKEQVVSALRASFNNPDRAVEYL
INGIPRSLLETAQSESTEAPSSESSLSTVPAPGSGNEPSSAVPASGDNPLAFLRNQDQFQ
QMRRLLQSNPSMLNAVLQQIGESNPQLLEMISQNQEDFIRLINESNEAPVTERAGSGLAD
PGFINLTPQDRDAIDRLKALGFPEHLVVQAYFACERNENMAANFLLSQGYDD
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcaccattaaaaaccttcaacagcaaacctttcagatagagattgagtcggat
aaatccgtaaaagatttaaaggacaagatcgagagtacaaagggtagtggagactatcct
agttcgagtcagaagttaatttatgccggtaaaatcatgctggacggagatccgctcaac
tcctacgacgtggacgagaaaaagttcattgtcgtcatggtgaccaagaaagcggcggca
gcagcggcaccaacccccgcggtggcagcagccctacccccaacacctgctgcggctccg
gaaccccccaagacggaagaaccaacaggtcaagtagcggacaaagaaccagagtcgtcc
aaagcttcagaagaaaagaaagaggatgaagagtcctcctctgagacagccgactgtgtc
atgggagaagactataataaaatggttcaaaatattgttgatatgggctacgacaaggag
caggttgtatcggctctaagggcaagtttcaataatccggatcgagcagttgaatatctt
attaatggaatccctcgttccctcttagaaaccgcccaatctgagagtaccgaagctcca
tcttccgaatcgtcgctctcaactgttcctgcccctggcagtggcaatgaaccttcttct
gctgttccagcttcaggagataatccccttgctttccttcgaaatcaagatcaatttcag
caaatgagacgtctccttcaaagtaatccgagtatgcttaatgctgttcttcaacaaatc
ggggagagcaatcctcagttattagaaatgatttcacagaatcaggaagacttcatacga
cttattaatgaatccaatgaagctccagtgacggagcgtgccggaagtggacttgcagat
cctggctttatcaatctaactcctcaagatcgtgatgcaattgataggttaaaagcattg
ggattccctgaacatcttgtagtgcaagcttatttcgcgtgtgagagaaatgaaaatatg
gctgcaaattttttgttatcacaaggatatgacgattaa
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