Lepeophtheirus salmonis (salmon louse): 121123953
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Entry
121123953 CDS
T08214
Symbol
l(2)k09022
Name
(RefSeq) uncharacterized protein l(2)k09022
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121123953 (l(2)k09022)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsm03009
]
121123953 (l(2)k09022)
Ribosome biogenesis [BR:
lsm03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
121123953 (l(2)k09022)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BP28CT
HEAT_HEATR1
TMP-TENI
Motif
Other DBs
NCBI-GeneID:
121123953
NCBI-ProteinID:
XP_040574972
LinkDB
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Position
1:22774824..22781579
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AA seq
1833 aa
AA seq
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MFFITLLPFYEYEIFARAVQILPEKNCPAYPHWLRSFKASCSPVSKQGILRHISGNDGFL
KLMTESLLSYKPLGAKLAHFYASYVTLSLNTMDSLREGQLILLLKVIFAGLKSSEKEFKS
CAYVLLSFILPRVEFTEKVSNRLVKIMNTITPCREVLSLIMVLYRTQGAKEKALRLLLKM
EDVVTSIFSKDSTEEIDDALSYKSVVCDTYVMCLVSLVNEDDDLLVPTLELEKLLSIINE
MLSSSWVPSVEAAKALAAKVSIVQIRMKALKKEEIKRLVKAISRLCKKILGLIRSLFPYE
SNKYSMKKSSAEADILFMDETNDSPSESQIEAKKILLDEAFINSTLSKKILSYSEYTKLI
SSGEVVDNIDLVTKVIGQSPQKFLLMQMEPLDLLNFTTNVMRLYPKNDGIISHCVHNFIA
LFESEHHMKLFEELKIDLRLLALPLLFACLPSAKKSANEIRLKIFSELGTKEISSEDNFN
HDIYKSLMEMSSLPSSFDDIKEELYQDSAVVVIGLLSFCNDKSDPVKSVNRILKFLNLIV
SSKMTMEDEKCNRVEEWIVKPLKEGSRGINSQLLDHVFDEILKMGSFTESEFEKISNEFI
LFASKSDKKRFKNLFFRVKTFIRTWGIAQDYMYENILANIFSLPLSSDYGVSTNIVTKLL
SEFLSYIEKCRHTNKRFISYNSHVFPRILASLSDLERTPETMGLCFDILNFVHSGKFKVI
SKNDNFLPLIGFILSHRAEIEADLGNLPYLMKEFKGKNEEQNLIALSKLCVDCDVHIFAR
LSLFLVNTPEISLVARFASKNLMNVSTIQDSFVSDSWSRIFDYFFHKMIAFLTQKNNECS
NFFWNLMMSSQKMGYGLNTFVSSKILEVLENNIVLIEDQVTLFNQFIDLSGCLKVEGDTM
MACRMVLDKLARVGVDDFVVKLNDIWGSSFFTSSTHARKKMDENSLKEIELKWAKTHFLL
ECILRRRNLGPKGISLIKPYFVLLKHALFYDQSSSSDSYSQDLVLSGVLAIIECLSESEL
STVDSINPELIVHCIRNSRIPNTKSTALLILAKSSACNPDYVLHNSIPIFTFMGNHFVKM
DSRHSFDVACQAIEIIIPHIQKVCDSDSEKLRSTTVKIITTFADAADDLPSHRFKTFLHK
LLVLLGENEYLWIFAMQLLSKTIYQKAKRAHEVQIKLMDLFESFNVLTQLETIIRIAVNT
KQNTSKLRSILALKEEKDEDKASNEFDLLKLKGLIFVTHLLTSRVFASQLTEALSTYQGD
NKKAIKKHPRELELLLEVAILNLEEVLKSSKDSKIHKHLVSQSEKVLESALNILPNEALI
GLMKSLLASETDSVLRKTLEVLNIKLGAVNFNEDDIELLEPLLNISFNNPVDYNRQMALM
AIRSLSRLLGSQYSKEFQNIAIKLCNKKYLSTLSGQHNLEASTLLCVIEILISIGPKAVP
LLSGFMNWILKLLAIGSNEAVVLNSTILATQKVVEAFGGFLNPFYCKLIIATCSLDKDGN
KHIKNLMLTLSSGIPTQSLINISLKCFQQLRDTPSSLDNLLEILKESLSNLSKKEAMTLC
PPLMDFFTLAFRYRLENENNQVDMIESSVIETFLTLTLKLPLDDFKPLFYRVLNSPEETC
HVTTIFHVILQVGKKLKSLFSFMIEPVISKLIAHLSKRFIKKEVDGIEDKILVPSLDSED
EQTVAFALEGLETILTYNKAETVMGSNYEDNVNVILNHYEIEKPSDTMLERMNACVSVLA
NSMEDDSQWKYLHYQVLLNLRSTNVKIRKYILKLISEFVDSRGDSYMSVLPDAVPFLAET
TEDDDKSIQKQTKNLLKKMENVFGQSIDNFFEM
NT seq
5502 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcatcactcttcttcctttctacgaatatgaaatattcgcaagagcagtccaa
atcctacccgaaaagaattgccctgcctatccccactggctacgtagcttcaaagcatca
tgttctcctgtctccaagcaggggattctaaggcatatctctggaaatgacggcttctta
aaacttatgacagaatctctactctcctataaaccccttggtgccaaattggctcatttt
tacgcctcttatgttactctttctctaaacaccatggacagtcttagagaagggcaattg
attctgcttttaaaagttatttttgcaggtctcaaatcatctgaaaaggagttcaagtca
tgtgcctacgttctcctttcttttattcttccaagagtagaattcacggagaaagttagt
aatcgacttgtgaagattatgaataccataacaccatgtcgtgaggttctatccttaatt
atggtgctgtatcgaacccaaggtgcaaaagaaaaagctctccggttacttttaaaaatg
gaggatgttgtcacaagtatattttccaaagattcaacagaggaaattgatgatgcattg
agctataaaagcgtggtctgtgatacatatgtcatgtgcttagtatccctggtcaatgaa
gatgatgacttattagttcctacccttgagctagaaaaactactttccattataaatgaa
atgctgagttcatcatgggtacctagtgtcgaagcagctaaagcccttgctgcaaaagtc
agtatagttcaaatacggatgaaagcattgaaaaaagaggagatcaagagactagtcaaa
gctatttcgaggctttgcaagaagattttaggtcttattagatccctttttccctatgaa
tccaataaatactctatgaagaagagttctgctgaagcagatatattgtttatggatgaa
acaaatgattctccttctgagagccagatagaagcgaaaaaaattcttctcgatgaagct
ttcatcaactcaacactaagtaaaaagattttgtcttattccgaatacaccaaacttatt
tcgagtggcgaagtcgttgataacattgacctcgttaccaaagtcatcgggcaaagtcct
caaaagtttttattgatgcaaatggaacctcttgatttgcttaactttaccacaaatgtg
atgagattgtatcccaaaaatgatggaattatttcgcactgcgttcataatttcattgct
ctctttgagtctgaacatcatatgaaactatttgaagagctgaaaattgatcttcgcctc
cttgctcttcccttgttatttgcttgccttccctctgcaaaaaaatctgctaacgaaata
aggcttaaaatattttctgaattgggtacgaaagaaatctcgagtgaggataatttcaat
cacgatatctacaaaagcttgatggaaatgtcatctttgccttctagttttgatgacata
aaggaagaactatatcaagattctgcagtagttgtcattggtcttctatccttttgtaat
gacaaaagtgatcctgtcaagtctgtgaatcgtattttaaagtttttaaatctgattgtc
tcatccaaaatgacaatggaggatgaaaaatgcaatcgtgttgaggaatggattgttaag
cctctcaaagaaggatcccggggaattaatagtcaattgttagaccatgtttttgatgaa
attttgaaaatgggttcattcactgagtcagaatttgaaaaaatttctaatgaatttatt
ctctttgcatccaagtctgataaaaagcgcttcaaaaatttgttctttagagtgaaaact
tttatccgcacttggggcatagcacaagattacatgtatgagaacattctagccaacata
ttttcattgccactttcctcagactatggagtatcaaccaatattgtcactaaactgctt
tctgaatttctatcatacattgagaaatgtagacatactaacaagaggtttatttcgtat
aattctcacgttttccctcgaatattggcaagtctgtcagatcttgaacgaactcccgaa
actatggggttgtgttttgatattctgaactttgtccactcggggaaatttaaagtcata
tctaaaaatgataactttcttcctctcattgggtttatactaagccatagagctgaaata
gaggctgatttagggaatttaccatatctcatgaaagaatttaagggaaaaaatgaagaa
caaaatcttattgccttgtcaaagttatgtgttgactgtgatgttcacatttttgctaga
ctctccctattccttgttaacacacctgaaattagcttggttgcacgttttgcctcaaaa
aatttgatgaatgtatctacaattcaagattctttcgtttcagactcttggtcaaggata
ttcgattattttttccataaaatgattgcgttcttaacgcagaaaaataatgaatgttcc
aactttttttggaatctaatgatgtcatcacaaaagatgggatacgggttgaatactttc
gtttcctcaaagatcttggaagtcttggaaaacaacattgtgctcattgaagatcaagtt
actttgtttaatcagtttatcgacctcagtggttgcttaaaagttgaaggtgataccatg
atggcttgtaggatggttttggataaacttgctagggttggcgttgacgattttgttgtg
aaacttaatgatatttggggtagctccttctttacatcttctactcatgcccgtaaaaaa
atggatgaaaattctttgaaggaaattgaattaaaatgggcgaaaactcattttctattg
gaatgcattcttcgtagaagaaatttgggccctaaaggaatatctctgattaagccatat
tttgtgcttcttaagcatgctcttttctatgaccaatctagttcatctgattcatattcc
caagacttggttctctctggtgtcttagctattattgaatgcttaagtgaatctgaatta
tcaactgtggattcaatcaatcctgagttgatagttcactgcattcgtaattcacgaatc
ccaaatacaaaaagcacagctctcctcatcttggcaaaatcatctgcttgcaatccagac
tatgtattgcataactctatacccatttttacgtttatgggtaatcattttgttaaaatg
gattctaggcattcgtttgatgttgcctgtcaagcgattgaaattataatacctcacata
caaaaagtatgtgactccgactctgaaaaattgcgttcaactactgtcaaaataatcact
acctttgcagatgctgctgatgatcttccctctcatagattcaaaacttttctgcataag
ttgctagttctgcttggtgaaaatgagtatctctggatatttgctatgcaattactttcg
aaaacaatttatcagaaggccaaaagggcccatgaggtacaaattaaacttatggatttg
ttcgagtcatttaacgtcctgactcaattggagaccattattcgaattgccgttaacaca
aaacaaaatacttctaagctgaggtcaattttggcactcaaggaagagaaagacgaggat
aaagctagtaatgaatttgatctactcaaactaaaaggcctcatttttgttactcatctg
ctaacatctagagtttttgcgtctcagttgacagaagctctttccacctatcaaggggat
aacaaaaaagcgatcaagaaacatcctcgtgaattggaattactcttggaagttgccatt
ttaaatttggaagaagtgttgaagtcttccaaagattccaagatccacaagcacttagtt
tcacaatcagaaaaagtacttgaatctgctttaaacattcttcctaacgaagctctaatt
ggacttatgaagtctcttttagcttctgagacggattcggtcctacgtaaaactctagag
gttcttaatatcaagttgggagcagttaatttcaatgaagatgatattgaattattggag
cctcttctcaacatttcttttaacaatccagtggattataatcgtcaaatggctctcatg
gcaattcggtctttgtcaagacttttagggtcgcaatacagtaaagaatttcaaaatatt
gccattaagctctgcaataaaaaatatttatcaacgctctctggacagcataatcttgag
gcgtccactctattgtgtgttattgagatactaatttcgattggtccaaaggctgttcct
ctactatctggatttatgaattggattttgaaattactcgcgatagggtccaacgaagcc
gttgttcttaactcaaccattcttgcaactcaaaaggtagtagaagccttcggaggcttt
ctcaatccattttactgtaaattgataattgcaacctgttcgctggataaagatggtaat
aaacacatcaaaaacttgatgctgactctctcctctggtataccgactcaatctctgatt
aatatcagtttaaaatgcttccagcaacttcgggatactccatcttctctggacaattta
ttagagatactaaaggaaagcttatcaaatctttccaagaaagaagctatgactttatgt
ccaccacttatggattttttcacattagcatttcgttatcgattggaaaatgaaaacaat
caagttgatatgattgagtcctccgtcattgaaacatttttgactctcaccttaaaatta
cctctagatgattttaaaccactattttatcgagtactcaattcacctgaagaaacttgt
cacgtaacaaccatttttcatgtgattcttcaagttgggaagaaactcaaatccctcttt
tcttttatgattgagcctgtcatttctaaattgattgctcatttatcgaagagatttatt
aagaaggaagtggatggaattgaggataaaatcttggttccttcattggattcagaagat
gaacaaactgttgcttttgctcttgagggactggaaactattcttacctataacaaagca
gaaactgtaatgggttcaaactatgaggataacgttaatgttattctcaatcattatgaa
attgaaaaaccgtcggatactatgttagagaggatgaatgcctgtgtgagtgtccttgct
aacagtatggaagacgactctcaatggaaatatcttcattatcaagtcttgttgaatctt
agaagtactaacgtgaagattcgtaagtacattttgaaactaatttccgaatttgtggat
tcaagaggagatagttatatgagtgtcctccccgatgctgttccctttttagcagaaact
acggaagatgacgacaagagcattcaaaaacaaaccaaaaatctgcttaagaaaatggag
aatgtatttggacagtccatcgataacttctttgaaatgtaa
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