Lepeophtheirus salmonis (salmon louse): 121124049
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Entry
121124049 CDS
T08214
Symbol
SmD2
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121124049 (SmD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsm03041
]
121124049 (SmD2)
03032 DNA replication proteins [BR:
lsm03032
]
121124049 (SmD2)
Spliceosome [BR:
lsm03041
]
Complex A
U1 snRNP components
Sm proteins
121124049 (SmD2)
U2 snRNP components
121124049 (SmD2)
Complex B
U1 snRNP components
121124049 (SmD2)
U4/U6.U5 tri-snRNP components
121124049 (SmD2)
Complex C
U2 snRNP components
121124049 (SmD2)
DNA replication proteins [BR:
lsm03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
121124049 (SmD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
DUF2986
Motif
Other DBs
NCBI-GeneID:
121124049
NCBI-ProteinID:
XP_040575091
LinkDB
All DBs
Position
9:complement(25397773..25403539)
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AA seq
115 aa
AA seq
DB search
MALNRPKSELSPEELEKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDR
HCNMVLESVKEMWTEMPKTGKGKKKAKPVNKDRYISKMFLRGDSVILVLRNPLAK
NT seq
348 nt
NT seq
+upstream
nt +downstream
nt
atggctctgaatcgtccaaagtctgaactctctccggaagagttggagaaacgggaagaa
gaggaattcaacacgggacctttgagtgttttaacgcaaagcgttaagaacaacacgcaa
gtcctcatcaattgccgtaacaacaaaaagcttttggggcgagtgaaggcctttgatcgg
cattgcaatatggtcctggagtcggtcaaagaaatgtggactgaaatgcccaagacggga
aaaggtaaaaagaaggctaagcccgtcaacaaggatcgctacatctccaaaatgttctta
agaggcgattctgtcattttagtattaagaaatcctctcgcaaagtag
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