Lepeophtheirus salmonis (salmon louse): 121124154
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Entry
121124154 CDS
T08214
Name
(RefSeq) uncharacterized protein
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03015
mRNA surveillance pathway
lsm04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121124154
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121124154
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsm01009
]
121124154
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121124154
03036 Chromosome and associated proteins [BR:
lsm03036
]
121124154
Protein phosphatases and associated proteins [BR:
lsm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121124154
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121124154
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121124154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
HEAT_EF3_N
HEAT_EZ
Vac14_Fab1_bd
TOR1L1_N
PDS5
Htt_N-HEAT_1
CLASP_N
Adaptin_N
Cnd1
TAF6_C
IFRD
M11L
INTS7_N
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
121124154
NCBI-ProteinID:
XP_040575215
UniProt:
A0A0K2U9P1
LinkDB
All DBs
Position
9:complement(19844496..19863709)
Genome browser
AA seq
591 aa
AA seq
DB search
MSNFKSESSKDDPLYPIAVLIDELRNEDVHLRLTSIKKLSTIALALGVERTRSELIPFLT
DTVYDEDEILLALAEQLGTFTPVVGGPDYVNCLLPPLECLAIVEETIVRDKAVESLRHIA
DQHSPMDLETYFVPLVKRLAVGDWFTSRTSACGLFSVCYSRSSPAVKAELRTLFRSLCQD
DTPMVRRAASSKLGEFAKVVEVEYLKSDLIPMFVNLAKDEQDSVRLLSVDACVSISSLLQ
TEDVEQLVMPTLKHTAEDKSWRVRFMVADKFTDLQKAVGPEITKADLVPAFQKLLKDSES
EVRAAAAHKVRNFCQDLDPSVQETVIMNSILPCVKELVGDANQHVKSALASVIMGLSPIL
GKNNTIEYLLPLFLTQLKDECSEVRLNIISNLDCVNEVIGIQQLSKSLLPAIVELAEDAK
WRVRLAIIEYMPLLAGQLGVEFFDEQLNALCMTWLVDHVFAIREAATNNLKKLVEKFGTD
WAQQTIIPKVIAMSRDQNYLHRMTCLFCINVLAEACGTEITEKLMLPTVLSMASDTVANV
RFNVAKTLSILGPKLNTSTVSSQVKPTLNQLHEDNDFDVRFFASEAYAVLV
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacttcaaaagcgagagttcgaaggatgatcccctctatcccattgctgtccta
attgacgaacttcggaatgaggatgttcaccttcgtcttacgtccatcaaaaagctctcg
acaatcgccttggccttgggagtggagagaacccgctcggagctgatcccctttttgaca
gacacggtctacgatgaggacgagattctgttggccctcgcggagcaactggggactttc
acgcccgtggtgggagggcccgactatgtgaactgtctccttccgcccttggagtgcttg
gccatcgtggaagagacgatcgtgagggataaagccgttgaatcactacgacacatcgca
gatcaacattcccccatggacttggaaacgtatttcgttcctctggtcaaaagactggcg
gtgggagattggttcacttccaggacaagtgcctgtggcctcttctccgtttgctactcg
cgctcttcacctgcagtcaaagccgaactcagaactttgttccgtagtttatgtcaggat
gatactcccatggtacgtcgcgctgcatcatccaagttaggggaatttgctaaagttgtt
gaagtagaatatctcaaatctgatctgatccctatgtttgttaatttagctaaggacgag
caggattctgttcgccttctctctgtggatgcctgcgtatcaatttcatctctccttcaa
actgaagatgttgaacaacttgtaatgccaactctgaaacatactgctgaagacaagtct
tggagagtacgatttatggttgccgataaatttaccgacttacaaaaagctgtgggacca
gaaatcactaaagccgaccttgttccggcgttccaaaaattgttaaaggattcagaatct
gaagtgagagcagcagcagctcataaagtaaggaacttttgtcaagatttggatccatct
gttcaagaaacagtcatcatgaacagcattttaccatgtgttaaagaactagtaggagac
gctaatcagcatgttaagtctgctttagcatcagttattatgggtttatcgcccattctt
ggaaaaaacaacacaattgaatatcttcttcctctgtttttgacccaattgaaagacgaa
tgttcagaagttcgattaaacataatttccaacttggattgcgtgaatgaagttatagga
attcaacagctatcaaaatctctgttgcctgccattgtagaactagccgaagatgctaaa
tggcgcgttaggttagctattattgaatacatgcctctcctagcgggtcagttgggtgtc
gagtttttcgatgaacaactaaatgcactttgcatgacttggcttgtagatcatgtattt
gccattagagaagcagcaacgaataaccttaagaaattggttgaaaaatttggaactgat
tgggctcaacaaacaattatccctaaagtcatcgcaatgtctagagatcaaaattacttg
catagaatgacttgtttattttgtattaatgtattggcggaagcttgtgggacagaaatt
accgaaaagcttatgcttccaacagttttaagcatggcctcagatacggtcgccaatgtt
cgattcaacgttgctaaaacattaagtattcttgggcctaaacttaatacctcgacagtt
tcgagtcaagtgaaaccaacattgaatcagttacatgaggataatgatttcgacgtccga
ttttttgcatccgaagcgtacgctgttctggtttga
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