Lepeophtheirus salmonis (salmon louse): 121124433
Help
Entry
121124433 CDS
T08214
Symbol
Polr2I
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9 isoform X1
KO
K03017
DNA-directed RNA polymerase II subunit RPB9
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03020
RNA polymerase
lsm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
121124433 (Polr2I)
09124 Replication and repair
03420 Nucleotide excision repair
121124433 (Polr2I)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsm03021
]
121124433 (Polr2I)
03400 DNA repair and recombination proteins [BR:
lsm03400
]
121124433 (Polr2I)
Transcription machinery [BR:
lsm03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
121124433 (Polr2I)
DNA repair and recombination proteins [BR:
lsm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
121124433 (Polr2I)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_RPB9
Zn_ribbon_TFIIS
Ogr_Delta
Motif
Other DBs
NCBI-GeneID:
121124433
NCBI-ProteinID:
XP_040575520
LinkDB
All DBs
Position
9:17233075..17799995
Genome browser
AA seq
126 aa
AA seq
DB search
MDPQAATTGPGFVGIRFCLECNNMLYPKEDKENKALMYACRNCDYKQLADNNCIYVNKIM
HEVDEVTNIVPDVIGDPTLPRSEDHPCPKCKHKEAVFFQSESRTADDEMRLYYVCTNPQC
THRWTE
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atggatccccaagccgcaacgacaggacctgggttcgtcggaattcgattttgtctagaa
tgcaataacatgttgtacccaaaggaagataaagaaaacaaagccttgatgtacgcctgt
agaaattgtgattataagcaattggctgataataattgtatctatgtgaacaaaattatg
cacgaagtggatgaagtgaccaacattgtacccgatgtaattggcgatcccactcttccg
aggtccgaagatcatccctgtcctaagtgtaaacacaaagaagccgtctttttccagtcg
gaatcaagaacggcagatgatgaaatgagactttactatgtttgtacaaatccccaatgc
actcatcgatggacggaatag
DBGET
integrated database retrieval system
