Lepeophtheirus salmonis (salmon louse): 121124537
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Entry
121124537 CDS
T08214
Symbol
TfIIFalpha
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121124537 (TfIIFalpha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsm03021
]
121124537 (TfIIFalpha)
Transcription machinery [BR:
lsm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
121124537 (TfIIFalpha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
121124537
NCBI-ProteinID:
XP_040575631
LinkDB
All DBs
Position
9:6779515..6781277
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AA seq
506 aa
AA seq
DB search
MANNGASSGSMEEEVSEFIVRVPPRNSRKSHHVMKFNASLNIDFTKWAQGTVRMVRENNQ
KASKAAEAEMPKYGAGSEFGREQKEEARRKKYGYNKKKYKPEDQPWLIRVGDKKTGRRYR
GIREGGVAENTTYYVFTHAQDGAFEAHPISDWYNFTPILTYKTLNSEEAEEKFAERGKIL
NHWALMVNKKIRSAQDEEEEMDDDGSKSVKRSSKKDNAFKISDMDDWVEEGDELETDSED
EKKKKNDSDDEGKKKKGKDSRTKKKRSKEDVQNEAFEDSDDGDDECREVDYMSDESSDSE
NEMMEKTDAKGVDQDQGLARMLDSESSSDEDEIKKKSDKEEEVNEENEDEAGTSKKDKKK
KKDKKGSGNKKDGKQSTNSSRSSSPTPNGSDKQAKVDKRKSIIDNILDPGLEPAQKKSRL
ETFGSSSSSIVSPLSGSEAALEEDVRRYLARKPMTTTELVKKIHSKRFQDSSSEELMPLL
VNVLKKVKPITSKTKGIMYLSLKPDK
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggccaataacggagcttcgtcggggagtatggaagaagaagtatctgaatttattgtt
cgtgtaccccctagaaactctagaaagtctcatcatgtcatgaaattcaacgcatcttta
aatatagacttcactaaatgggcacaaggaactgttcgtatggttcgtgaaaacaatcaa
aaagcatccaaggccgctgaagcagaaatgcctaagtatggtgcaggttctgaatttggt
agagaacaaaaagaggaggctcgaaggaaaaaatatgggtataacaaaaaaaagtacaag
cctgaggatcaaccctggttgatcagggtcggagataaaaaaactggaaggcgctacaga
ggaatccgagaagggggagttgccgaaaacacgacttactacgtttttacccatgcacag
gatggggcctttgaagcacaccccatttcagattggtacaattttactcccattttaact
tacaaaaccctgaattctgaagaagctgaagaaaagttcgcagagagagggaaaattctt
aatcattgggctctcatggtgaataaaaagattcgttcggcgcaggatgaagaggaagaa
atggatgatgatggtagtaagtctgtaaaaaggagtagtaaaaaggacaatgcttttaag
atatccgatatggatgattgggtggaggaaggtgatgagcttgaaacggattctgaagat
gaaaaaaagaaaaagaatgatagcgatgatgaaggaaaaaagaagaaagggaaagactca
aggacaaagaagaagcgttccaaagaagatgttcaaaatgaagcatttgaggactccgat
gatggggacgacgagtgccgagaagtggattacatgtcagatgagagttcggattccgag
aatgaaatgatggaaaagacagatgccaaaggagttgatcaggatcaaggacttgcacgt
atgctggattctgaatcaagctcagatgaggatgaaatcaaaaagaaatccgataaagag
gaggaagttaatgaagaaaatgaggatgaagcaggaacctccaaaaaagataaaaaaaag
aaaaaagacaagaaggggtctggcaataaaaaagatggaaaacagagcaccaatagttcc
cgctcatccagccctactcctaacggaagtgataaacaagccaaagtggataaaaggaag
tccattattgataatatattagatcctggccttgagcctgctcaaaagaaatcgcgatta
gagacttttggatccagttcttccagtattgtaagtcctctctcgggatcagaggcagca
ctagaagaggatgtgaggaggtacttggctcgtaagcccatgaccacaacggaattggtc
aagaaaatccattcgaagcgctttcaagatagtagtagtgaagagcttatgcctcttctc
gttaatgtattgaagaaagtgaaaccaattacttctaaaaccaaagggattatgtattta
tctcttaaacctgataaataa
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