Lepeophtheirus salmonis (salmon louse): 121124572
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Entry
121124572 CDS
T08214
Name
(RefSeq) uncharacterized protein
KO
K27498
focadhesin
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121124572
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
121124572
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3730
DUF2569
Motif
Other DBs
NCBI-GeneID:
121124572
NCBI-ProteinID:
XP_040575662
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Position
9:25443669..25447658
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AA seq
1113 aa
AA seq
DB search
MDEIKDRLSQLSESPFTDSLQILNTIHPIAEELYKAEPLKAQKICELLQTALGSRNPCIS
SAVIEVLSRWKASKNISTFVQELLYQLPRAAYPGTFVSAIGRLESQDVSRTYLPILKHCP
SSWPWVLDEIQKGEFKSFNALYTQILLDPSPSLHLTPFRVALRECLLQMSHAESQFFIKE
SLQWLNPTPENRFWILEITKKECQEKRLLMYSALIINKVITGMDPSELLKLIQLELRKYN
GPDNILSVCLVILTKAFDKSFFGHYMVFLQVFKDFFDVIRNKNVLGICICSLLGITLVPS
KLLDQNVWTIASTLIKKYYKASDVGTKEFVGDTIYLQWNKDVNLSFLKVNLLSCISHSET
SCLEWLSTLSNVKLTLEHLPIVKTLFLGTSYPTVLQASVDVLSRILDIYPQRSMGVLSII
LHKLSKEKNPGACNVLIKSLSIVAKDKNCIKFVIKVINSLTINSRSGTIKLKLLFDLYQI
EERTYAYLHKALEEKYSTDESNVTKAFIILRICSKKSSKHASDLLPLLSDILNGQGHGSA
SVLALKAIQAMVADSVIDIETTFKALQPKIMADGLNDVRIALIEICTLIPEFDIPTDKYE
TFSNHILKFLWSCTVQKQEHPMALRKAAFSAIGKYGLYRQKFDFVPSNLTNGFNPIELVE
NEETNLYVPGECWIEILINSTKEDLVLIEDLLMDFLRDEVHEFPKSVYYLPHKKNEKTRM
DYSQVLSETSVLRYILECCQSKDTISSVLASCLRILSIEYSQQFPPLNWEFLSSMSKNYK
PECFNIIVNQLRKSECARNVLEGMLISEMSFEMILCVFKKLEIILQYHPCTELKTFIQNV
SSTVIDKTPLISLLDILKEKASICGKYDVFINFIKSLHDHVHLDSLLYSHYLELIENLPH
DPYWTQLSNPTLSNCKVEVDLMNAFRMRRILSRKDKNSLIWFNDCIEALTTHSGVFDSSS
VLQLLLSAFIESRENAESNRLWLMDFMGLILSLVRRKKQEYFPILFDVFISALVVFSGVD
TFIFRPIISVPSSKNKTVDFLASSIQVCLTSSEKPWNTFGIQLGDWLLSFLKDDKIDKIY
KEGIRSSLSSFKYGNDFEEIYMKLIQNFYGYIS
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggatgagattaaagatcgactgtcccagctctcggagtctcctttcacggactcgctt
cagatattgaatacaatacaccccattgctgaggaactctataaagcggagccgctaaaa
gctcaaaagatctgtgagcttctccaaacagcccttggatctcgaaacccctgcatctca
tctgctgtaattgaggtactttctcgatggaaggcttcgaaaaacatatccacattcgtt
caggagcttttgtatcagttgcctcgagctgcatacccaggtacatttgtttctgcgatt
ggacgtcttgaatcgcaggatgtttctcggacatatttgcccattctcaagcactgtccc
tcatcatggccatgggtactcgatgaaatccagaaaggagaatttaagtccttcaacgcg
ctgtatacacaaatacttctggatccctctccttctcttcatttgacacctttccgagtt
gctcttcgggaatgcttgcttcaaatgagtcatgctgagagtcaattcttcataaaggag
tctttgcaatggctaaatcctacacccgaaaatcgcttctggattttagagataactaaa
aaagagtgtcaagaaaagagattattaatgtactctgcattgataattaataaggtgatc
actggtatggatccctctgagctgttgaaactaattcaattagaactaaggaaatataac
ggcccagataatattctaagtgtttgccttgttattcttacaaaggcatttgataaatct
ttttttgggcattatatggtgtttcttcaagtctttaaggatttttttgatgtaattcgg
aacaaaaatgttttagggatatgtatttgctcacttttgggtataactctagttccgtca
aagctcttagaccaaaacgtatggacgattgcatcaactctcatcaagaagtactataaa
gcttctgacgttggaactaaagaatttgttggagacactatatatctccagtggaataag
gatgtaaatttaagctttttaaaagtcaatttactcagttgtatctctcactccgaaact
agttgtttggaatggttgtccaccctaagcaatgtgaagttaacgcttgagcatttgcct
atcgttaaaacacttttcctaggtacgagttatccaaccgttcttcaagcttcagtggat
gttctttctcgtattcttgatatataccctcaaagatcaatgggagtgctatccatcatt
ttacataaattatctaaggaaaaaaatcccggagcgtgtaatgttctaataaaaagtcta
tccatcgtagcaaaagataaaaactgcataaagtttgtgattaaagttataaactcactt
actattaactcacgctcaggtacaatcaagctcaagcttttatttgatctttaccaaata
gaagagaggacatatgcttacttacataaagctttagaagaaaaatattccacggatgaa
tcaaatgtgacaaaggcttttataatacttcgaatttgctcaaaaaaatcatcgaagcat
gcttcggatcttttacctttgctatcggatatattaaatggacaaggtcacggctctgct
tcagtattggccctaaaagcaatacaagccatggttgcagactctgtaatagatattgaa
acaactttcaaggctttacagcccaaaataatggcagacggtctgaatgatgtacggatt
gctcttatagaaatttgtactcttattcctgagtttgatattccaactgacaaatatgaa
acattttctaaccatatcttaaaattcctttggtcttgtacggtacaaaagcaggagcat
ccgatggcccttcgaaaagctgcgtttagtgccattggtaaatatggtctctacagacag
aaatttgactttgttccaagtaatttgacgaatggcttcaatcctattgaactagtagaa
aatgaagagacgaatctgtatgtcccaggcgaatgctggatcgaaattctcattaattct
actaaagaagacctagtactcattgaagacttattgatggattttttaagagatgaggtt
cacgaatttcctaaatctgtatattatctccctcataagaagaatgagaaaactcgaatg
gattattctcaagttttatctgaaacaagtgttcttaggtatattttagagtgctgtcaa
tctaaagacactatatcatcagtgttagcctcttgcttacgcattttgagcattgaatat
agtcaacaatttccaccgttaaattgggaattcctgtcttccatgtccaagaattataag
cctgaatgttttaatatcatcgttaatcaattgaggaaatccgagtgtgcacgaaatgtt
ttagaggggatgttgatttctgaaatgagcttcgaaatgattttgtgtgtatttaaaaaa
cttgaaatcattcttcaataccatccatgtaccgaactcaagaccttcatacaaaatgtt
tcttccacagtcatagataagactcctttgatctccctacttgatatcttaaaagaaaag
gcctctatttgtggaaagtatgatgtattcatcaattttatcaaatcattacatgatcac
gtacatttggatagtctgctctattcgcattatcttgaactgattgagaatttaccacat
gatccatactggacgcaattaagcaatcccactctttcaaattgtaaagtcgaggtggat
ctgatgaatgcttttagaatgagacgtattctttctcgaaaggacaaaaattcacttatt
tggtttaatgactgcattgaagccctgactactcattctggggtatttgactcatcctct
gttcttcaattgttattgagtgctttcattgaatccagagagaacgcagagtcaaatcga
ttatggctaatggattttatgggtcttattttgagtttggtccgacgaaaaaaacaagaa
tatttccctattttgtttgatgtattcatttcagccctcgttgttttttcaggagttgat
accttcatttttcgcccaatcatttctgtcccctctagtaagaataagacagttgacttt
ttggcttcttccattcaggtttgtttaactagttctgaaaaaccctggaataccttcgga
attcaattaggagactggcttttaagttttttaaaggatgataagattgataaaatatat
aaagaaggtattcgttcttctttaagctcattcaaatatggaaatgactttgaggaaatt
tatatgaaacttatacaaaacttttatggttatattagttga
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