Lepeophtheirus salmonis (salmon louse): 121124749
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Entry
121124749 CDS
T08214
Name
(RefSeq) uncharacterized protein isoform X1
KO
K07611
lamin B
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121124749
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lsm04812
]
121124749
Cytoskeleton proteins [BR:
lsm04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
121124749
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Filament
PDZ
PDZ_6
PDZ_2
Fib_alpha
Sec10_N
DUF2721
DUF5129
Motif
Other DBs
NCBI-GeneID:
121124749
NCBI-ProteinID:
XP_040575865
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All DBs
Position
9:29597262..29630259
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AA seq
736 aa
AA seq
DB search
MLELKRRQSQLRSSLPTRLNKSTPKMVVSWRPRSITVDRGTRGFGLSLIYRGLDKYEQKD
TGIFVARVVKDGQAEKYGVRENDKIVSINAKTPRNVDDAVNVIKSAGNQIKLVVLREEDV
PDNDDPNDHSSIASHDWLHGHPISRSGSARSFNTTYGGGNASPSPLPSKSPGPQRTSQSD
FLRQQAEYQRQQQQQKQLEEEEEHRRKQMLYEEEELRRKQMHYEEEKRSNRMKEQVREMI
DNNELRPKSPGRYIMDQPQYSYHMNNNNTINSETRKSTENITKIVESIPKSSNKYKSTQS
LHELGLDNYPNPDMPESSRLTRKEEKMSLQNLNNRLASYIDRVRQLQNENNKLSHQIKTV
EEYQSKELCNVKDLYDKQTEELKEALDTMNKQYNQLKVGAEGLLEENQDLKDKLRKKEND
YKNSMNHVSSLEDQIRSLTNKLSEEVTERKKIADELQDVLPELDSLRDRLADAKRHLDEE
QLKKANLENQCSRLEEDLKFKLQLLEKELMEVKTRKEIEITEMDSKLQDEYEDRLQKALE
ELREVYDKQMAQSREDFAKLYDNRVRDLQTSLSEERGSNASGVQELKESKTRIETLISKV
SDLEGFNLNLNQKISDLSQAMDDIKSTHRAQMNAKDSEIKRLLDELSNQLKEYQNLQDIK
VALDMEIAVFRSLIEVEEDRLGLGDDDDVNDDDETGYIHPPPPPQRVISISNLKRYIHSR
NLSLVHTFIQICHCPS
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgttggaactcaaaagaagacaaagtcaactccggtcatctcttcctacgagactgaac
aaaagcactccaaaaatggtggtgagttggagaccccgatctataacagtagatcgagga
actcgtggtttcggactatccctcatttatcgaggactggataagtatgaacaaaaggac
acggggatattcgttgcaagagttgtaaaagatggacaggctgagaaatatggagttcgt
gaaaatgacaaaattgtttccattaacgccaaaactcctcgcaacgtggacgacgccgtc
aacgtcatcaaatctgcgggtaatcaaatcaaattagttgttcttcgtgaagaagatgtt
ccagacaacgatgatccaaatgatcactcctccattgcttcacatgactggctacatggt
catcccatctcaagatcaggatctgcaaggagctttaataccacatatggaggaggaaac
gcaagcccctctcctttaccttcaaaatccccaggccctcaaaggacttctcaatctgac
tttttaagacaacaggctgaatatcaacgacagcaacagcagcagaaacagcttgaggaa
gaggaggaacatcgaagaaaacagatgctctatgaagaggaggaacttcgaagaaaacag
atgcattatgaagaggaaaaaagatcaaatcgcatgaaagaacaagtcagggaaatgatt
gataacaatgaattgcgaccaaagtcccctggacgctatattatggatcaaccgcaatat
tcgtatcatatgaataataataacacaattaattcggaaacaaggaaatccacagaaaac
attaccaaaatagtggaatccattcctaaatcatccaacaagtacaaatcgactcaatct
ctacacgaattgggccttgataactatcctaatccagatatgccagaaagttctcgactc
acacgaaaagaagagaaaatgtctctacaaaatttaaacaataggcttgcaagttatatc
gaccgagtccgtcaacttcaaaatgaaaataacaagttgagtcatcaaattaaaactgtt
gaagaatatcaatccaaagaactgtgtaacgtcaaagacttgtatgacaaacagactgaa
gagctcaaggaagcccttgatactatgaacaagcagtacaatcagctcaaagttggtgct
gaaggtttacttgaagaaaatcaggatcttaaagacaaacttcggaagaaagagaatgac
tacaaaaattcaatgaatcatgtatccagtctcgaggatcaaatccgaagtttgacaaat
aaattatctgaagaagtaactgaacgcaaaaagattgcagatgaacttcaagatgtactg
cctgaattagatagtcttcgtgaccgtttagccgacgcaaaacgccatcttgatgaagag
caattaaagaaggccaatcttgaaaatcaatgttcccgtttggaagaagatctcaaattc
aaacttcaattactagaaaaagaattaatggaagttaaaacacgcaaggaaatcgaaatt
actgaaatggacagtaaactccaagatgaatatgaagatcgtctacagaaagctctcgag
gagcttagagaagtttatgataaacaaatggctcagtcacgagaagactttgccaaactg
tatgacaatagggtgcgagatcttcaaacatccttgtccgaggaaagaggaagcaatgca
agtggagtgcaagaattaaaggaatctaaaactcgcattgaaacattaatttctaaagtg
tcggatcttgagggatttaacctcaatttgaaccagaaaatttcagacttgtctcaagca
atggatgacataaagtccactcaccgagcacagatgaatgcaaaggatagtgaaatcaaa
cgtttgctcgatgaactctccaaccaattgaaggaatatcaaaatcttcaagatatcaag
gttgctttggatatggaaatcgctgttttccgtagtcttattgaagtggaagaagatcgc
ttaggattaggtgatgatgacgacgtcaatgacgatgatgaaacgggatatattcatcct
ccccctccacctcaaagggttatatcaatctccaatttaaagagatatattcactctaga
aacctttctttggtacatacattcattcaaatttgtcactgtccctcttaa
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