Lepeophtheirus salmonis (salmon louse): 121125054
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Entry
121125054 CDS
T08214
Name
(RefSeq) TBC1 domain family member 25 isoform X1
KO
K24799
TBC1 domain family member 25
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121125054
Membrane trafficking [BR:
lsm04131
]
Others
Specific organelles associated proteins
Auto phagosome
121125054
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PB1
Motif
Other DBs
NCBI-GeneID:
121125054
NCBI-ProteinID:
XP_040576091
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Position
10:complement(2352653..2356521)
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AA seq
724 aa
AA seq
DB search
MSIFEYERDAVRVKAKCIKLSGLEENRKFSIDPNLTSFEILRSLLTRAFDVGDHFCISFI
SSDDEWLPLLSDWDLDAAIISSSDPFLSLKIAESDRKGFVEEAATASVHYLKKKVEKTLP
SITQRFQRALIVAEESLLKSSSSSLSSHHNFQYSNSVMGRNSPLADKEFQNFKDGVGELT
HPRELRLAVYQGGIEPPLRKVVWKHILGVYPKGLNGKQRISYIKDKSREYHALKKTWTDI
MLQGTMTDQIKLITNMVKKDVFRTDRHHSFFAGEENKNVNILFNILTTYALNHPSVGYCQ
GMSDLLAPLLVIMLDEPQSYIVFCALMKRLKNNFLSDGKSMTKKFNHLSEGIMFYDPEFF
AYLKLHGADDLLFCYRWLLLEMKREFSFEDSCRVLEVLWSSLPPSHPEEEDGLPLYEVKF
EDISSTQVPTVKKISDTPYARVAALRKRTGSSDASLGDKISQHAKIGHKNLSLATEGCRP
RIQSDGSVNDRIRKVDYDLMTKSVSADKVKKVVKDLHDFYKLASVKSGNNTNSSNITATT
TNNGNNSNSTDAHQQFSHSTSKISTSSESEKSEGGDNTNHSNEETSTVPDKMSDIEELNS
SSTVALIDPFDPNEVGYSQANGSNLSIVCKRLPPPTDFGDGNPFLMFLCISILIQHRGHI
LSHKFDYQEIAMYFDRLIRRHNVEKTLHIARKLFAEYLNEDWSLSETNSNMKFGHHQNYK
NKVL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtccattttcgagtatgaaagagatgcagttcgtgtcaaagcaaaatgtatcaaactc
tctggactcgaagaaaatagaaagttttccattgacccaaatttgacgtcatttgaaata
ttgagaagcctccttactcgagcctttgacgtcggagatcatttttgtatttcctttata
tcctcagacgatgaatggcttcccctcctatcagactgggacttagatgcagctattatc
tcttcttcggatccatttttaagtcttaaaatagcagagtctgatcgaaagggcttcgtg
gaagaagctgcgacagcaagtgttcactatttaaaaaaaaaagtagaaaaaaccctacct
agtattacacaacgttttcaaagagctctcattgttgctgaagaatctcttctcaagtca
tcctcatcttccctatcctcacaccataatttccaatatagtaacagtgtcatgggaaga
aatagtccacttgcagacaaggagtttcaaaactttaaggatggggtaggagagctaacg
catccgcgagagctccgccttgctgtatatcaaggagggattgaaccacctctgagaaaa
gtggtgtggaagcatattcttggagtataccccaagggtctaaatggtaaacaaaggatt
agttatatcaaggataagtcaagagagtatcatgctcttaaaaaaacatggactgatatt
atgctccaagggactatgactgaccagatcaaactaatcactaacatggtgaagaaggat
gtctttagaacggatagacatcattccttctttgccggggaggaaaataaaaatgtgaat
attctatttaatattctaaccacttatgctcttaatcatccctctgttggatattgccag
ggtatgtcggatctgcttgctcctctcttggttattatgttggatgaaccccagtcctat
atcgttttctgtgctctcatgaaaagattgaaaaataatttcctttctgatggaaagtcc
atgacgaagaagtttaatcacttatctgagggaataatgttttacgatcccgagttcttc
gcatacctgaaacttcatggagcagatgacttgttattttgttaccgatggctcctctta
gaaatgaaacgagaattttcatttgaggactcttgtcgagtcctggaagtcctttggtcc
tccttgcctccttctcatccggaggaagaagatggtttacctctttatgaagtcaagttt
gaagatatatcttcgactcaggttccaactgttaaaaaaatatctgacactccctatgct
cgtgttgctgctcttcgaaaacggactggaagctcagatgcttcacttggagataaaata
tctcagcacgccaagataggacataaaaatctatctttggcgactgagggttgccgacct
cggattcaatctgatggatctgttaatgatcggattcggaaagtagactacgatttaatg
accaaaagtgtgagtgctgataaagtgaaaaaagttgtcaaggatctacatgatttctat
aagcttgcctccgtgaagagcggcaataataccaatagttccaacattactgctaccacc
acaaataatggtaataatagtaatagcacagatgcccatcaacaatttagtcattctaca
tccaaaatatcaacttcatccgagtctgagaaatcagaagggggagataatactaatcat
tctaatgaagagacgtcgacagttccagacaaaatgtctgatatcgaggagttaaattcc
tcttcgacagtagccttaattgatccttttgacccaaatgaagtgggctattcacaggct
aatggaagtaatttatcaattgtttgcaaacgcttgcctcctcccacagactttggggac
gggaatccttttttaatgtttttatgtatctccattctgattcagcaccgtggacatatt
ttatcccataagtttgattaccaggaaattgccatgtattttgatagactcattcgtaga
cacaatgttgaaaagactctacacatcgcccgaaaattatttgcagagtacttaaatgag
gactggtctctctcagagactaattcgaatatgaaatttggtcatcaccaaaactataaa
aacaaagtcttataa
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