Lepeophtheirus salmonis (salmon louse): 121125110
Help
Entry
121125110 CDS
T08214
Symbol
Tfb4
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03022
Basal transcription factors
lsm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121125110 (Tfb4)
09124 Replication and repair
03420 Nucleotide excision repair
121125110 (Tfb4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsm03021
]
121125110 (Tfb4)
03400 DNA repair and recombination proteins [BR:
lsm03400
]
121125110 (Tfb4)
Transcription machinery [BR:
lsm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
121125110 (Tfb4)
DNA repair and recombination proteins [BR:
lsm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
121125110 (Tfb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
121125110
NCBI-ProteinID:
XP_040576148
LinkDB
All DBs
Position
10:complement(9310509..9312276)
Genome browser
AA seq
305 aa
AA seq
DB search
MSPSESTGSGGDSKAQLLIIVMDMNPNQKLFLHDPTALTSVLDNLLCFANAHLMLHPSNA
LATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISS
QTDSPLSGSLAMALSYINRRRKENMDLSARILVITASGDTASQYMNYMNVFFTAQKLDVL
LDTCMLQIDSPLLQQGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVD
FRAACFCHRQLVDIGFVCSVCLSIFCKFSPICTTCQTIFRVPPPLMGGKKKKSHAHGSSS
VLKRK
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagtccatcagagtccacgggaagcggaggagacagcaaagctcaactcctcattatc
gtcatggatatgaatccaaaccagaagctattcctccacgatccaaccgccctaacctct
gttctggacaatcttctctgcttcgcaaatgcacatctcatgcttcacccgagcaacgca
ctagccacccttggaagcatggcctccggatcctatttcctctatccacctccggatgat
ccagcagcagataacgaaatacgacagttggacggacaatatgagttattcactcttgtg
gaaacaacggttcgctcaaagttcattgagcttctccagtctgaagcgggcatctcctct
caaacagattccccactctctggatcccttgccatggccctctcatacataaatcgccgc
agaaaagaaaatatggatttaagcgcacggatcctggttataacggcttcaggggacacg
gcatcacagtatatgaactacatgaatgtgttttttactgctcaaaaattggatgtccta
ctcgatacctgcatgcttcaaatcgattctccactcttacagcaaggagcggatataact
gggggcatgtatttcaatgttccagataacgcggccttgcttcaattccttctttggatc
tttctgccctctgcagaaatgcgtccacaactgggacttccatctgctaacaaagttgac
tttagggctgcttgcttctgtcatcgtcaacttgtggatattggctttgtgtgctccgtt
tgtttatccatcttttgtaaatttagtccgatttgcactacatgccaaactattttccgt
gttcccccacctttaatgggaggcaaaaagaaaaaaagtcacgcacacggttcgtcgtct
gttttaaagagaaaataa
DBGET
integrated database retrieval system
