Lepeophtheirus salmonis (salmon louse): 121125114
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Entry
121125114 CDS
T08214
Symbol
PolA1
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121125114 (PolA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsm03032
]
121125114 (PolA1)
Enzymes [BR:
lsm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
121125114 (PolA1)
DNA replication proteins [BR:
lsm03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
121125114 (PolA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_2
DNA_pol_B_exo2
ParD_like
Motif
Other DBs
NCBI-GeneID:
121125114
NCBI-ProteinID:
XP_040576162
LinkDB
All DBs
Position
10:complement(10388830..10393743)
Genome browser
AA seq
1463 aa
AA seq
DB search
MEESSPTKTELDSPGIGGSRSRRERNGSVAKKSRFDALKKLKETRLSGKKNSYELGEVDN
VYDLVEEKEYAKRVKERRQEDWIVDDDGNYVEDGRELFDEEEEEESAGKMSKTHSSKKKK
VFHKSSNKSIKNMFLSMPQAKEKSVANFGNLDEDEILGELLNEVKKTPGSTPEVSLLPAP
KRFKSSENSTPTSSPQSLNPFRRKGTGIKRPKSSVTTPKTNAKLDLLESEETIESPSQKV
EEFDEEVPMDFTPFDDDIVDDNHIEEVKSQEIKIKEEVEEEEKDNRGFLSEMSNKENINA
PSFGNWGNKSEEDSTFSASVVIENSQLPFETLPSGEKVLKIYWLDAYEDIYKHPGTVWLF
GKVYIKSLNTFASCCITVKNIPRRVFLLKRDLFKDSMDSVPTTGDVYKEFEARVASRFKI
SEYKSKPVSKLYAFEIPGVPHEGEYLEVVYSAKYSAVTPDLIGNSFSRVFGSNQGFLEHF
LISRKIKGPCWLEIKKFNSSGPPISWCKFEAFVESPSFISVISSNGQQIPAVTVMSLNMK
TVINPKSLQNEIVSLSAVVQQDFALEKSMKAMPSSHFVALTRPVDVVWPFDIQKKLNASF
KSSVTKMDSERALLAFILAKIVKIDPDFIIGYDMAGFDLDVLFHRTIKNKIPHWSRLGRL
RRSATINFNAFKKTEAYAGRIIADLKISAKELIRCKSYEIASLFEKILGHSISGRTEYDS
IEVHKSYEDSEGIVKFVVSSLNDASYVLQCICELNVVPLAMQITQIAGNVLSRTLLGGRA
ERNEFLLLHAFSEKNYIVPDKSFSNKKNRGNHDLGDESSIPVKAGRKKPSYAGGLVLEPK
RGFYDKYILLMDFNSLYPSIIQEYNICFTTVERKKVVNEEYIPELPRDDAAVGILPTEIR
KLVESRRAVKTLLKDPNSTPEQKSQYDIRQKALKLTANSMYGCLGFSHSRFHAKPLAALI
TSRGREILLQTRDLVEKNLNLEVIYGDTDSIMINSNSKDFDEVFRLGAKIKSEVNRLYKL
LELDVDGVFRYMLLLKKKKYAAITVEKKNGEYIYTTELKGLDIVRRDWCQLSSDTGKYIL
ENIMKDISEDERIALIHRKLELITEDLQNGRVTLAQLAITKQLTKDPTDYADTKALPHVQ
VALRMNSVVGGKRLKSGDTVPYVICLDGTDRPATQRGFHIDEVANENSNLKVDTKYYLSQ
QLHPVLSRICDPLDGTDSSRIAQCLGLDPDQFKKIIRSTESNEERELISEVDKFRPCNKL
KIKCVCGEIITLESIVTGSPSSRDFHLSLTQCPKPDCGHIPLSQVNVIKNKLVQEIRRHI
KEYYSGWIICEDPACSGRTRQLPIRFQQSFPVCSTCEKATMYREYSDVSLYTQLLYYSKL
FDLKSARETFNSRRPDIQLDLSRVRGGEEKYQVLFDTVKKILNLNNYSIVSLSKVFDGLL
PFTAEKLRNRRGNTSSMYSSQSF
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atggaagagtcttctcctaccaaaacagagttggattctcctggaataggaggaagtcgt
agccgtcgtgagagaaatggctccgtggccaaaaagtcccgatttgatgccttaaaaaag
ctgaaggaaacgcgactctcagggaagaagaactcgtacgagttgggcgaagtggacaac
gtctacgatcttgtggaagagaaggagtatgccaaacgcgtgaaggagcgacgtcaagag
gattggatcgtggatgatgatggaaattacgtggaagacggtcgagaactctttgacgaa
gaggaagaggaagaatctgcggggaaaatgtccaaaactcattcctccaaaaagaagaag
gtcttccataaatcctccaacaaatccatcaaaaatatgtttttatcaatgcctcaagcc
aaggaaaaatccgttgcgaatttcggtaatttagatgaggacgagatccttggagagtta
ctgaatgaggtgaagaaaactcctggatccacgccggaagtctccctattgccagctcct
aagcgcttcaaatcttcagaaaatagcactcccacgtcctcaccacagtctctcaatccc
tttagacggaaagggacaggaattaaacgacccaagtcgtctgtcactacgcccaaaaca
aacgctaaattagatttattagaatcggaggaaaccattgaaagcccctctcaaaaagtt
gaagaatttgatgaagaagtccccatggactttactccttttgatgatgatattgtcgat
gataatcacattgaagaagtaaaatcccaggagattaagatcaaagaagaagtagaagaa
gaggaaaaggataatagaggttttctatctgaaatgagtaacaaagaaaatataaatgct
ccatcctttggaaactggggtaataaatcagaggaggattctactttctcagcctcggtc
gtcatagaaaacagtcaattaccttttgaaactctacccagtggcgaaaaagtgctcaaa
atatattggctagatgcttacgaagatatctataaacatcccggaactgtatggcttttt
ggaaaagtatatataaaatccttgaacacatttgcatcatgctgtattactgtaaagaat
atcccgcgtagagtattcttactaaaacgggatttatttaaagactccatggatagcgtg
ccaacaacgggtgacgtctacaaagagttcgaagccagagtggcgagtcgatttaagata
tcagaatacaagtctaagccggtatccaagttgtatgcttttgagatacctggcgtacca
catgaaggtgaatacctggaagtggtgtactcagccaagtactctgcagttactccggat
ctaattggtaattcattttccagagtatttggaagtaaccaagggtttcttgaacacttt
ttaatttccagaaagattaaaggtccttgttggttagaaataaaaaaattcaactccagt
gggcctccaatctcttggtgcaaatttgaggcttttgtagaaagtccatcatttatatca
gtgattagttctaatggacaacaaatccctgcggtcaccgtgatgtctcttaatatgaaa
acagttatcaatccaaaaagtcttcaaaatgaaatcgtgtctcttagtgctgttgttcaa
caggattttgctttggaaaaatctatgaaggcaatgccatcaagtcatttcgttgcatta
actcgacctgtcgatgtcgtctggccttttgacattcaaaaaaaattaaatgcgtctttt
aaatcatctgtgactaaaatggattccgagagagccctactagcttttattcttgctaag
attgtcaaaattgatccagattttatcataggatatgatatggctggatttgatttagat
gttcttttccatcgtactatcaaaaataaaatccctcattggtctagattgggtcgatta
agacgtagtgcgaccattaatttcaatgcctttaaaaagaccgaagcttatgccggaagg
ataattgcggatcttaaaatttctgctaaagagctcattcgctgtaagtcgtatgaaatt
gcatcattatttgaaaaaatactggggcactccatctcaggaaggactgaatacgatagt
attgaagttcataagtcatatgaagattcagaaggaatcgttaaatttgttgtatcgtca
ttgaatgatgcatcttatgtgctacagtgtatatgcgaacttaatgtagtgcctttagcg
atgcagatcactcagattgctggaaatgtactctcgagaacattattgggaggtagagct
gaaagaaatgaatttttattattgcatgcattttccgagaagaactacatcgttccagac
aagagtttttccaataaaaaaaatcgtgggaatcatgatttgggagatgaatcctcaatc
cccgttaaagcaggacgtaagaagccttcatatgcaggtggtcttgttcttgaaccaaag
agaggtttctatgataagtacatactgcttatggactttaattccttgtatccatcgatt
attcaggaatacaatatttgttttacgactgtagagcgtaagaaagtggttaatgaggag
tatattcctgagttgcctagagatgacgcagccgtaggtattttgccaacggaaattcgg
aaattagttgaatcccgcagagctgtaaaaacattgcttaaagatcccaattccacacca
gagcaaaaaagtcaatatgatattcgtcaaaaggctctgaaattgacggctaattcaatg
tacggttgtttggggtttagccactctcgttttcacgctaaacccctagcagctttaatt
acatcaaggggtagagaaattttacttcaaacacgggatttagtagaaaagaacttaaat
cttgaagttatttatggtgatactgattcaataatgataaattctaattccaaagacttt
gatgaagtatttcgtcttggtgctaagatcaaaagcgaagtaaatagactctataaattg
ttagaattggatgttgatggtgtttttcggtacatgcttcttcttaagaaaaaaaaatac
gctgccattaccgtagaaaagaaaaacggagagtatatttacactacagagctcaagggt
ttggatattgtgaggagagattggtgtcaattgtcatcagatactgggaaatatattctt
gaaaatatcatgaaagatatcagtgaagacgaaagaatcgcactcattcatagaaaacta
gaattgataacggaagatcttcaaaatggtcgagtaacattggctcaactcgctataaca
aagcagttgactaaggatcctacggactatgctgatactaaagcccttcctcatgtacaa
gtggcacttcgaatgaactccgttgttggaggcaagcgtctcaaatctggggatacagta
ccgtatgtgatatgtctggacggtactgatcgacctgctactcaaagaggttttcatatt
gatgaagtcgccaatgaaaattccaatctaaaagtggatacaaaatattatctatctcag
cagttacatccagttctttcaagaatctgcgatccattggatggaaccgactcatctcgg
atagctcaatgtcttggattagatcctgatcagtttaaaaaaataatccgttctactgaa
tctaacgaagagcgggaacttatttctgaagtggataagtttagaccttgtaataaattg
aagattaaatgtgtatgcggcgaaatcatcacgttagaatccattgtaacggggtctcct
tcctcaagagactttcatctctcacttacccaatgccccaaacctgattgtggacacatt
cctcttagtcaggtaaatgttattaagaataaattggtccaagaaattcggcgtcacatc
aaggaatattactctggttggataatatgtgaggatcctgcctgctctggacgaacacgt
caattgcctattcgatttcaacaatccttcccagtctgttcgacttgtgaaaaagcaacc
atgtatagggaatattccgacgtatccctgtacacacaactattgtattattcgaaactt
tttgacttgaaatcagccagagaaacgttcaatagtagaaggcctgatattcagcttgat
ttgagccgagtccgtggaggtgaggagaaatatcaagtcctcttcgacacagtaaaaaag
attttaaatctgaataattattccattgtatcgctaagtaaagtttttgatggactccta
ccattcacagcagaaaaattaaggaatcgccgaggcaatacttcttcgatgtacagtagt
caatccttttag
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