Lepeophtheirus salmonis (salmon louse): 121125193
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Entry
121125193 CDS
T08214
Symbol
LSm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03018
RNA degradation
lsm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121125193 (LSm7)
09123 Folding, sorting and degradation
03018 RNA degradation
121125193 (LSm7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121125193 (LSm7)
03041 Spliceosome [BR:
lsm03041
]
121125193 (LSm7)
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121125193 (LSm7)
mRNA degradation factors
5'-3' decay
Lsm complex
121125193 (LSm7)
Spliceosome [BR:
lsm03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
121125193 (LSm7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Tenui_NCP
Motif
Other DBs
NCBI-GeneID:
121125193
NCBI-ProteinID:
XP_040576262
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All DBs
Position
10:20462311..20464228
Genome browser
AA seq
111 aa
AA seq
DB search
MSSGTASNTGASSADKRKKESILELARYLEKDIRVKFIGGRECSGTLKGYDPLLNLVLDN
VTEYLRDPDDPYKLTEDTRPLGLVVCRGTGIVLICPQEGMESISNPFIAQE
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcggtacggcctcgaatacaggggcttcctcagcagataaacggaagaaagag
tctattttggagttagccagatatttggaaaaggatattcgggtcaaattcatcggtgga
cgtgaatgttcggggactcttaagggatatgatccacttttaaatttagtattagacaat
gttacggaatatcttcgagatcctgatgatccttacaaactaacagaagatactcgtcct
ctagggttggtagtttgtagagggactggcattgttcttatttgcccgcaggaaggcatg
gagtcaatctcaaatccattcatagcgcaagagtaa
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