Lepeophtheirus salmonis (salmon louse): 121125200
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Entry
121125200 CDS
T08214
Name
(RefSeq) serine/arginine-rich splicing factor 4
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121125200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsm03041
]
121125200
Spliceosome [BR:
lsm03041
]
Common components
Common spliceosomal components
SR proteins
121125200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
RRM_occluded
RRM_PARP14_3
SET_assoc
OB_RNB
Motif
Other DBs
NCBI-GeneID:
121125200
NCBI-ProteinID:
XP_040576270
LinkDB
All DBs
Position
10:complement(8571839..8576584)
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AA seq
233 aa
AA seq
DB search
MPGNHHRLYLGNISDDTRERDVEKFFKGYGKLREVALKNGYGFVEFEDHRDADDAVQDLD
GKDMNGSRVRVEFARSPREKRNSRYQSRRSPPRGRRGPPMKRNPPGRRTQYRIRVENLST
RTSWQDLKDYFRSCGEITYTNAHKPRNNEGVVEFGDKRAMENALDRLDDTDLGGRRIKLY
EEVGSSSSGSRRSRSYSREKFQSRSRSRSRDASRSRSRDVSRSRSRSYSRDRD
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgcctggaaatcatcatcgactttacctcggaaatatatccgacgatactcgtgagagg
gatgtggagaagttttttaagggctatggtaagctccgtgaggttgctttgaagaatggc
tatggctttgtcgagtttgaggaccacagagatgcggacgatgcagtccaggatttggat
gggaaggatatgaacggatctagagtccgtgtggaatttgcgagaagtccccgtgaaaag
aggaattctcgctatcaatcccgtcgcagtcctccccgtggtcggagagggcccccaatg
aagaggaatcccccagggcgacgaacacagtatcggattcgagtggagaacctctctact
cgtacatcgtggcaggatcttaaagattactttcgctcatgtggtgaaatcacttacacc
aatgcccataagccaaggaataatgagggtgttgttgaatttggagacaaacgcgcaatg
gagaacgcattagacagattagatgacactgacctgggaggtagaagaattaaactttat
gaagaagttggatcatctagttctggttcaagacgctctcgttcttactcgcgtgaaaag
tttcagtctcgctctagatctagatccagagatgcttctcgttcacgatccagagacgta
tccagatccagatcaaggtcttatagtagagatcgggattag
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