Lepeophtheirus salmonis (salmon louse): 121125276
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Entry
121125276 CDS
T08214
Symbol
Ino80
Name
(RefSeq) chromatin-remodeling ATPase INO80 isoform X1
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121125276 (Ino80)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsm03036
]
121125276 (Ino80)
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
121125276 (Ino80)
INO80 complex (yeast)
121125276 (Ino80)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
121125276
NCBI-ProteinID:
XP_040576364
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All DBs
Position
10:complement(20456610..20461549)
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AA seq
1341 aa
AA seq
DB search
MESESPLLSMDHFVMEISSGALGGGGSGQGSHIYSSDDDSEVLNMAEEECRQVSLTRKSQ
ALIFDRMKKCRRYLEIQKKMDGWEEEEEEEEEEEESSSDSDLDSKWDVVITEESFQSLFA
SHLERKKARAKLRNLPDNVPNGKDEDDTDSKVHSSSNISLTSMNKLSKLRPDPPPKKRRK
KKGDGSDEGKKYKNQGYTPRPPTIEQLNTRRRRAWVSIMKKEISKAQKARNLSQKEKLVN
SKRVATNCMRFVRQRAMQSQRVMKETVWRAKRLSREMQAYWRRFDRAEKLQKRQQEKVAE
EQRKMDVELLEAKRQQRKLNFLITQTELYAHFMASKIGTSSYSSEGSILSRLDEEDKTDE
MRRLGDDYDCEYEKTSAKDNAINALEVHASRSRVYDQDLDPCSVGLRMSSSEEMKEEREQ
PSIFEGMLKAYQLKGMNWLLNLYDQGINGILADEMGLGKTVQALSLLAYIAERYNIWGPF
LVITPASTLHNWQQEVTKFLPSFKVVPYWGSPQERKVLRHFWDQKNLHTQSASFHIVITS
YQLVISDFKYFNRIKWQYLVLDEAQAIKSSSSQRWKMLLEFKCRNRLLLSGTPIQNSMAE
LWSLLHFVMPTLFDSHQEFNDWFSKDIESTAENKSQIDEKQISRLHLILKPFMLRRIKKD
VENELTDKLEVLLYCPLTIRQKLLYMGLKKKIHIEELLSGLGSQNHNSALTSSLMNLVMQ
FRKVCNHPELFERREARSPFIMPTNPYLVPKLLYHDYVSRRTNKLHILMNKLNIFHPNNV
HASIKENTGGFSYTRFIGLSPKEQFYSYGSLLERWKIISALFEKKRRLKKSTFSNTLMLE
DMNHDSFLSDSGLVFVNPAKTFISHSDIILRSMPETLSHRLVRSRRNIKIEDINEDADED
YIKNLLPEFPYVQRPKMVFPCQPVDMPAFLYDLCPSVGALKRTLYSYDRSCAWHLLRQAQ
WNNEIMFGNNDYAHRYENRNSCFSHIPVGGLTASRPTHGWSHIVIPNKQTLVSDAGKLFV
LDSLLARLKEEGHRVLIYSQMTRMIDLLEEYMWHKKYTFMRLDGSSKIHERRDMVADFQE
RSDIFAFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLI
CKGTIEERILQRAREKSEIQRMVIQGGSFKGKNEQLKPNEVVCLLLDDEETERRYNARRG
EESSIQEQQKTSKRKKEEIPETPTKKIKTDDEAPCIDDDNCSSSSEPLPLFDFLGEKLGP
KKTKRGTGNKRGRPRVTPNIAGRGESVSMSQLIPTSPHSSIKRGPGRPRSKVQVGPSHQG
SRGGSSKIKRPAALNPVDGII
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgaatccccacttttatccatggaccacttcgtgatggagatatcctctggc
gctttgggtggaggagggagcgggcagggatcccatatctactcttcggacgatgactct
gaagtcttgaacatggcggaagaggagtgccgccaagtgtccctcacacgcaagagccag
gccctcatattcgatcgcatgaaaaagtgtcggagataccttgagattcagaagaagatg
gatggatgggaggaggaggaagaggaggaggaggaggaggaagagtcctcttcagactcg
gatttagactccaagtgggatgttgtgattacggaagaaagttttcagagtctcttcgcc
tctcacctcgagagaaagaaagcccgggctaaactccgcaatctgccagacaatgttccc
aacggtaaagatgaggacgacacagactccaaagtccactcctccagcaatatctctctt
acatccatgaacaaactgtcaaaactaaggccggatcctcctccaaagaaaaggcgtaaa
aaaaagggtgatgggagtgatgaagggaaaaaatataaaaatcaggggtatacacctcgg
ccgccaacgattgagcaattaaacacgcgtcgacgacgagcttgggtgagtataatgaag
aaggagatatcaaaggcgcaaaaagctcgtaatctaagtcaaaaagaaaaacttgtcaac
agtaaaagagtggcgacgaactgtatgcgttttgtgcgtcagagagccatgcaatctcaa
cgcgttatgaaagaaacggtctggagggctaaaagattatccagggaaatgcaggcctat
tggcgtaggttcgatagagcagaaaaattacagaaacggcaacaagaaaaagtggccgaa
gagcaacggaagatggatgttgaattactcgaagcaaaaagacaacaaaggaagctgaac
tttctcatcactcaaacagaattatatgcgcatttcatggcttccaaaattggaacgtca
tcctacagttctgaaggatccatcttgagtcgtttggatgaagaagacaagacggatgaa
atgcgaagattgggggatgactatgactgtgaatacgaaaaaacgtctgctaaagataac
gcgatcaatgccttagaagtgcatgcctctagaagtcgagtttatgatcaagacttggat
ccgtgtagtgttgggcttcgaatgtcctcttcggaagaaatgaaggaagagcgagaacaa
cctagtatttttgaagggatgctcaaggcgtaccagctaaagggtatgaattggcttttg
aatctatacgatcaaggtattaatggaatactagctgatgaaatgggattgggcaagacg
gttcaagctctgtccttacttgcatatattgctgaaaggtacaacatttggggccctttt
ctagtaataacccctgcctcgactctccacaattggcaacaagaagtaacaaaattttta
ccttctttcaaagttgttccttattggggatctccgcaggagcgaaaagtcttgagacat
ttttgggatcaaaagaatcttcatactcagtccgcgtcatttcatattgttataacgagt
tatcaacttgttatttcggatttcaaatattttaatcgaatcaaatggcaatatctcgtt
ttggatgaggcgcaagccatcaagtcgtcttcttcgcaacgctggaaaatgctattggaa
ttcaaatgtagaaatagactcttgctttctggcacacccattcaaaattcaatggctgag
ctgtggtctctccttcattttgttatgcctactttattcgattctcatcaagaatttaat
gattggttttctaaagacatagaatcaactgctgagaataagtcacagattgacgaaaaa
caaataagccgattacatttaatattaaaacccttcatgttacgtcgaataaagaaagat
gtagaaaatgaactgactgataaattggaagtgttactctattgtccattaacaatccgg
caaaagctgttatatatgggtcttaagaaaaaaattcacatagaggaattactttccgga
cttggttctcaaaatcataactctgccttaacttctagtcttatgaaccttgtgatgcag
tttagaaaggtatgtaatcatcctgagttatttgaaagaagagaagctagatcaccattc
atcatgcctacaaatccttaccttgttcctaagctactatatcatgattatgtctcaaga
agaacaaataaactgcatatattaatgaacaaactgaacattttccatcctaataacgta
cacgcatcaatcaaagagaacactggaggtttctcttacactcgttttataggattgagt
ccaaaagaacaattttattcatatggttccttacttgagagatggaagataatatctgct
ctttttgaaaagaaacgtcgactcaagaagagtaccttctccaatactcttatgctggaa
gatatgaaccacgattcattcttgtcagattctggattagtgtttgtgaatccagctaag
actttcatttctcattctgatattatactccgatcaatgccagaaacgctttctcatcgt
cttgtacgcagtagaagaaatattaagatagaagatattaatgaagatgcagatgaagat
tatattaagaatctccttcctgagtttccgtacgttcaacgccctaaaatggtatttcct
tgtcagcccgtagatatgcctgcttttttgtacgatctttgcccttctgttggggctttg
aaaaggactttgtattcttatgatcgttcatgtgcctggcatctcctacgtcaagctcaa
tggaataacgaaataatgtttggaaacaacgattacgctcacagatatgaaaaccgtaat
tcttgttttagtcatattccagtcggtgggcttacagcttctagacctactcatggttgg
agtcatattgtcattcctaataagcaaaccttggtgtctgatgctggaaagttatttgtt
ttggattcacttttagcgagattaaaggaagagggccatagggttttaatctactcacaa
atgacccggatgattgatctcttagaggagtatatgtggcacaaaaagtacactttcatg
cgattagacgggagctctaagattcatgaacgacgagatatggtagcagattttcaagaa
aggtctgacatatttgccttccttttatctactagagctggtggactcggaattaatttg
acagcagcagacactgttatcttttatgatagtgactggaaccctactgttgatcagcag
gcaatggacagagctcaccgattaggtcaaacaaagcaagtaactgtgtatcgtttgata
tgtaagggaacgatagaggaacggatattacaaagagcgagagaaaaatcagagatccaa
agaatggtcattcaaggaggtagctttaaaggaaaaaatgaacaactcaaaccaaacgaa
gttgtctgtcttcttctagatgatgaagagacggagcgtcgttataatgctagaaggggg
gaagagtcttcgatccaggagcagcaaaaaacttcaaaaaggaaaaaggaagaaatccct
gaaacgccaactaaaaaaataaagacggatgacgaagctccctgtatcgatgatgataat
tgctcatcctcatctgagcctcttcctttattcgactttttgggtgaaaaattaggtcct
aaaaaaacgaaaagaggaacgggtaataaacgaggaaggccaagagtaactcccaatatt
gctggacgaggagaatccgtttcaatgtctcagctcattcctacttctcctcacagttct
attaaaagagggccaggtagacccagaagcaaagttcaagtaggtccaagtcatcaaggc
agtcgaggtggatcctctaaaatcaaacgacctgcagcattaaaccctgtagatggaatt
atctaa
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