Lepeophtheirus salmonis (salmon louse): 121125285
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Entry
121125285 CDS
T08214
Name
(RefSeq) roundabout homolog 1
KO
K06753
roundabout, axon guidance receptor 1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lsm04515
]
121125285
Cell adhesion molecules [BR:
lsm04515
]
Immunoglobulin superfamily
ROBO family
121125285
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_3
C2-set_2
Ig_6
Ig_DSCAM-DSCAML_C
Sp38
Motif
Other DBs
NCBI-GeneID:
121125285
NCBI-ProteinID:
XP_040576383
LinkDB
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Position
10:complement(22952255..22956106)
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AA seq
979 aa
AA seq
DB search
MDLKIFYVYFLLESVFASPSIPEITHHPLNTTVIRGEPLTLECRSSGFPPPQIRWFKNGS
PLFTSPDRMILPDGSLLFLRVFHSKKETDSGDYHCTATNSQGSASSHIATLEIAYMKDEF
KALPRDTEATLGRDIVLECSPPAGHPEPVVKWKRDGDHLDLTSSKRIKIDGQGNLLIQSV
QKSDEGRYQCSAGNIANKKMSKAVRLNVNAPPHFISKPKDINAIAGEEAFIDCRVGGDPY
PDVTWTKERGDIDISKLKIVSGKGLRIKNVNSHDSGRYICTAKNRAGVISSSSFLTISIP
PVITERPLMNVQVRVSEDPIELHCGVSGSPSPFVYWSREADAEAGLLILPGEDKHGIIVK
VDGTLYIENPQTMHSGHYTCTAVNDAGSAIARSHVLVYDPIHQDSFPDTNAGLELDEARI
VTTLEEGVRISDISAVSSTSLKVKWHITARHKYIDGFYIRYRKVEDPIVATVRVLRSDLT
TSFVIDNLEEHSEYEVFIQPYFQNIVGKPASIKRIITHPDLPSEAPLIREARLLNSTTVF
LSWNTISPQHINGPLRGYEILIKGNGTSVNNTVDAETNEVTLIVNGMAPNKIYMIQISVI
NSIGHGPFSSPLEISKGFFDEAHTPHLPIDHGNKDVKTTWIIAIVAVLTFVLIFISGVFF
YKRKFHSLENLQGKPLPQGYLPTSTSSEEFHCHLYQKTNSGKLHTGLWIDRDYEKSSNSS
EKKLLNDARTPQSSSSGHSDTEYAYVDNKHNISSFTTSSGGSSTGRKAMESPEPYATTDI
LQTNYSRPLSTKSGPCCNTSCHYADPIFVSRKCSTSGESHSCDNLINTNGVVRPSLNQVP
NLLEMIPPPPVHPPPPHSVHYCQSEVRCSHESMISPQYLFHHPVYTSCSATPTYTKSSST
PRSMRQNLHRASDKSLSNEPSTSNSSSASRRLNNFDRHPFPEGGQCRLVQQPTQQRRSLS
PSESSDEDESSSYYPRIQK
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggatctcaaaatattttacgtctattttttgcttgaatctgtttttgcttctccctca
attccggaaatcactcatcatcccttaaacacaactgtcatccgtggggaacccttgact
ctcgaatgccgctcttccggcttcccaccacctcaaatccgttggttcaaaaatggttcc
ccactttttacatccccggatcgaatgatccttcctgatggatccctcctttttctccga
gtgtttcactccaaaaaagaaacggactcaggggactatcactgcacggcgaccaactcc
caaggctctgcatcaagtcacattgccactcttgaaatagcttatatgaaggatgagttt
aaagcattgcccagagatacggaagccactcttggacgagacattgttttagaatgttct
cctcctgctggacatccagagccagttgtcaaatggaaaagggatggagatcatttagat
ctcacctcatctaaacggatcaaaattgacggacaaggaaatttactcattcagtctgtt
caaaaaagtgatgagggtcgataccagtgctccgctgggaacattgcaaataagaaaatg
tccaaggcagtgcgattaaatgtcaatgctcctccccatttcatttccaagccaaaagac
atcaatgccattgcgggtgaagaggcctttatcgattgtcgtgtgggaggagatccctac
ccagatgtaacatggacgaaagagagaggagacattgatatttccaagttaaagattgta
agtggaaaaggactccgaatcaaaaatgtgaattctcatgatagtggccgttacatctgc
actgctaagaatagagcgggtgtcatttcctcaagctctttcttgacaatatcaattccc
ccagtcattacggaacgtccattaatgaatgtgcaggtacgagtgtcggaagatccaatt
gagttgcattgtggggtttctggatctcctagtccatttgtatattggtctagagaagca
gatgcggaagctggacttctcatactccctggagaggataaacatgggattattgtaaag
gtcgatggaactctttacatagagaatccgcaaacaatgcattcgggacattatacatgc
actgccgtaaatgatgcaggatctgctattgcccgctctcatgtattagtgtacgacccc
attcatcaagactcatttcctgacacaaatgcaggattagaactggacgaggcaagaatt
gtcactactttggaagagggtgtgcgaatcagtgatatttctgcagtgagttccacgtcc
ttaaaagtcaaatggcacattactgcaaggcacaaatatattgatggattttacattcga
tatagaaaagtagaggaccccatagtggccacagttcgagttttacgctcagatttgacc
acctcttttgtgattgataatttagaagagcattctgaatatgaagtgtttattcagccg
tatttccaaaacattgttggaaaacctgcctccatcaaaagaatcatcactcatccagat
cttccttcagaggctccgttgattcgtgaagcccgtcttcttaattctacaacagttttc
ttatcttggaacaccatatctccacaacacatcaacggacccctcagaggatatgagatt
ttaatcaaaggaaatggaacttcagttaacaacactgtcgatgctgaaacaaatgaagtc
actttgattgtgaacggaatggctccaaacaagatttacatgattcaaatctctgtcatc
aattccattggacacgggcccttctcatcacccttggagatatccaagggcttttttgat
gaagcacacacccctcacctacccatagatcatggaaataaggatgtgaagaccacatgg
atcattgctatcgtggccgtactcaccttcgttctcatcttcatttctggcgtttttttc
tataaacgaaaattccactccttggaaaatcttcaggggaagcccttgccacaaggatat
ctaccaacaagcacttcttctgaggagtttcattgtcatttataccagaaaacaaattct
ggtaaattacacactggactctggattgatagagactatgaaaaatcatccaattcctcg
gaaaagaagttattaaatgatgctcgtacaccacagtcaagctcatctggacattcagat
acggagtatgcctacgttgataacaaacacaacatttcttcctttacgacaagtagcgga
ggatcatccactggtcgaaaagcaatggaatcaccagagccttacgccacaacagatatc
ctgcagacaaattattctagacctttgtcaaccaagagtggcccttgctgtaatacatcc
tgtcattacgcagatcccattttcgtgtcacgtaaatgttccacctctggtgaatcccat
agctgcgataacctcatcaacacaaatggagtagtaagaccttcgctaaaccaagttcct
aatctcctagagatgatccccccacctccagtacaccctccaccaccccactcagtccat
tattgtcaatcagaagtacgttgctcacacgagagcatgatctcaccccagtatttattt
caccaccccgtctacacatcttgttccgcaaccccaacctataccaaatcatcatctaca
ccaagatccatgagacaaaaccttcatcgagcttcagataaatccttatccaatgagccg
tcgacctcaaactccagctcggcttctagaagacttaataactttgataggcatccattc
cctgagggaggacagtgtcgtttggtgcagcagccaacccagcaacgaaggagtttatct
ccgagtgagtcctctgatgaggatgaatcatcctcatattatcctcgtattcagaagtaa
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