Lepeophtheirus salmonis (salmon louse): 121125289
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Entry
121125289 CDS
T08214
Symbol
osa
Name
(RefSeq) trithorax group protein osa isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121125289 (osa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsm03000
]
121125289 (osa)
03021 Transcription machinery [BR:
lsm03021
]
121125289 (osa)
03036 Chromosome and associated proteins [BR:
lsm03036
]
121125289 (osa)
Transcription factors [BR:
lsm03000
]
Eukaryotic type
Helix-turn-helix
ARID
121125289 (osa)
Transcription machinery [BR:
lsm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121125289 (osa)
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
121125289 (osa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
121125289
NCBI-ProteinID:
XP_040576386
LinkDB
All DBs
Position
10:complement(17765267..17779514)
Genome browser
AA seq
1666 aa
AA seq
DB search
MPYPQPGASPGPPHPPNASYPYPPGPRPGPYGPYAYRPNSAPPGPYSPYPSYPSGGPPGA
GGPPAPPPWSPSIQGKGPPNALPPRPAAHYPTRSPHPPMKPYPSTTGPPPPGSYNGPPNY
NGPPGTLPLPPPVSSSSGAPPPGSSPNYPANYMSHVGIPPTNANPYPGMGPPNNGGPPNN
NSNNNNSGPPSSLSSGPNNAHPTSPAPPRNDEKTSPATNNSGHSQAPPVTSPVATSASSD
GIPVHDDTSQQSTLSQSSDRSDGGRQTPKGPHNFMNVSGGFPPPPGSPHSGARSPGAASM
GSTSHESGYPRDMVSPGWQRTAASPVSAPTSRGSDSLTRLFELDDDPGRRPWLERLLAFM
EEKGTPITQCPTISKNPLDLYKLYIYTRDRGGYIECNRNKSWKDIASQLGIAASSSGAYT
LKKHYGKNLLPFECYFDRGGIDPGPILAQVEASGKKKGKNASNPSHPPPVPSPGSQDSRD
SYSGSGTNSQEGYPGSYPVGPGGNGPNSYSSYPPNVSGDRPPPHPGIPIHQKEPIRLVNP
FDDSATYNNQYRPGLGPSGYPPQGPPPPNSGYGGYPPPRHSGPEGYPHTGSGYPPTGYPP
PRPGWPPQGNYIGPQHPNGTAPPPSGTPPSSSASINNVSSSSGVSSDTYGRGSSVTPPGW
NNNPPPPNSYGPRGPYPPPQAPPSSVAPPTTQQNSVAYTPQGYPPPPSNDQYQQKPTSGS
GVAPMNSGSTPPTPSVQKPPPSSSPAVPTPQPELQSGRPVILRVNQQVPSSAILHPSSSS
SSSSSLSYSSSFESPNNPSQKPYPGSGPPPTASQPGHFGPIKSNPPSTGSPIPTANSGPR
PGYIPYRGQRPPMYPPGGQPGWQNRYPGPPYNSSGAPDRNNWSNNPNNSGGPPAGAPRGP
GPWGPERPPMASGYIYNNQPNGPPWNNAMMRPGMRAPFRPEMRPTGPPGSYSQSNVRPGF
PGGRGRELLFPPGCVEATQPLLIKRRKYNKTDIQPVDGWRLVMTLKSGLLMESTWALDAL
NILLYDDNAFTYFGLSNMPGLLEAILEHWRSSLLSMFNITDDLELEDSTCRQQVRKRGHQ
VSIDYLSTVHKRKEDGVDGEKVMSACSDEGSMDMELGIAKNIELDDKVQILTGFNYTKKP
RFGLEDSGEYSVDKKDEEIFVTDEDRIWDLSERSSYDINGYEHWRQGGGNTTKHIITHYA
SGDLGLVPFVRVLKDLSTKKPLQSSSPPAPPQPLPLPRPEEPSPITLNGETQNSDVEDGQ
DHPKEEDEDIIDRIKRVTGIVFRDPNEARTRWTTKNLEDENYMRDEPSLLLTSDSQDSIG
KRSLCISTILRNLSFLPGNEYELSKNATFLTICGRLLLLYHWHPLRTVKQRNYDRGEDDD
TGESCTSLNGDSEWWWEYLHVIRENVMVSIANIAGALELKHFDEVIVRPLLDGLLEWAIS
SSAYAQDPFPNVGPHSPISPQRLAIEALCKLSLQESNVDLILSTPPYSRIEKLCRLLAKK
LYRYEDQVLREFSINLLYYLSGANSGVARTIATADTTIGLLLGFIEQAEQNALVVAQQHG
VNALRDNPDSMGTSLDMLRRAASTLSNLSQHPDNIPLFLRQEQRLLSLVMSQILDQGVEA
ILSNVLFNIGKTSSPPVPFISEKTSSPTIVTSTINNNNKCSSVENK
NT seq
5001 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatccacagcctggagccagtcctggacctccccatccgccaaatgcgagctat
ccttatcctccggggccaaggccaggtccatatggaccttatgcatacagacccaatagt
gcaccacctggaccttattcgccctatccttcatacccctcgggaggaccgccaggagca
ggaggaccgcccgcaccacctccttggagtccctccattcagggaaaaggtccacccaat
gctctaccgcctcgtccagccgcgcattacccgacacgctcccctcacccaccgatgaaa
ccttatccttcgacgaccggccctcctccaccaggtagttacaatggacctcctaactat
aacggtccccctggaactcttccactacctcctccggtttcatcgagtagcggcgcacca
cctccgggttcatcaccaaattatcctgctaattatatgtcacatgttggaattcctcca
accaatgcgaacccttatcccggaatgggacctcctaacaatggtggtccgcccaataat
aatagtaacaacaacaatagtggtccaccatcatctttaagttcaggtcccaataatgca
catccaacaagtcctgctcccccaagaaatgatgaaaaaacctctcctgccaccaacaat
agtggtcacagtcaagcccctccagttacgtcacctgttgcaacatctgcaagttcagat
ggtattcctgttcatgatgatacgtctcaacaatctacattatctcagtcgtcggatcgc
tcagatggaggacgtcaaacccctaagggtccacacaatttcatgaacgtctctggtggt
tttccacctcctcccggcagcccacacagtggagcacgctctcctggcgctgctagtatg
gggtcgaccagtcacgaaagtggatatccccgtgatatggttagtcctggttggcaaaga
actgcggcgagtcctgtatctgcacctacgtctcgaggttcggatagtttgacccgtctt
tttgaattggacgatgatccagggagaagaccttggttagaaaggttattggcctttatg
gaagagaaaggcactcctatcacacagtgcccaactatttcaaaaaatccattagacctc
tataagttatatatctacacgagggatcgaggaggttacattgagtgtaatcgtaataaa
tcttggaaagatattgcttcgcaattgggtattgcagcctcatcaagtggagcctatact
ttaaaaaaacactacggaaaaaatttacttccctttgaatgttactttgatcgaggagga
atcgatccaggtccaattctggcacaagttgaggcatctggaaagaagaagggaaaaaat
gcctctaatccgtcgcatccccctcctgtaccttctccaggatcccaggactctcgagat
tcatactctggatctggcacaaattctcaagaaggatatccaggatcttatccagtagga
cccggaggaaatggacccaatagttatagtagttatccacctaatgtttctggagataga
cctccacctcatccaggaatcccaattcatcaaaaagaaccaattcgacttgtaaatccg
tttgatgattctgccacctacaataatcaataccggccaggtcttgggcctagtggatat
ccacctcaaggtccccctccaccaaactccgggtacggaggatatcctccaccgagacat
tcaggacctgaaggatatcctcacactgggagtggctatccccctactggataccctcca
ccaagaccagggtggcctccacaaggcaactatatagggcctcaacatcctaatggtact
gctcctccaccctctgggactcctccatcctctagtgcttccatcaataatgtatcttcc
tcgagcggagtgagtagtgatacttatggccggggaagctcagtaacacctccaggatgg
aataacaatccgccaccacctaatagttatgggccgcgtggtccttatccccctcctcaa
gcacccccttcgtctgttgctcctcctacaactcaacaaaatagtgttgcatacactcct
cagggttatccaccaccaccatccaatgatcaatatcagcaaaaaccgactagtggtagt
ggtgtagcacctatgaatagtggatcaacgccacccacacccagtgtacagaagccgcct
ccgagttcatcacccgctgtcccaacgcctcaacctgaacttcaaagcggaaggcctgtt
attttaagagtaaaccagcaggtcccttcttccgccatacttcatccctcttcttcttcc
tcctcctcttcttcattgtcttattcttcgagctttgagtcaccaaataatccttcccaa
aaaccttaccctggctcagggccgcctcccactgcaagccaacctggacattttggacct
attaagtctaatccaccgtcaactggatctcctatacccacggcaaattcaggtccaagg
cctggatatattccttatcgtggacaacgtcctcctatgtatccgccaggtggacaacca
ggatggcaaaatagatatcctggccctccttataactcttctggagctcctgatagaaat
aactggagtaataatcctaacaatagtggagggcctcctgctggagcgcctagaggtccc
ggtccttggggccctgagagacctcctatggcatccggttatatatataataatcaacca
aatggccctccttggaataatgcgatgatgagaccaggaatgagggctccgtttagaccc
gaaatgcgacctactggacctcctggaagttactctcagtcgaacgttagacctgggttt
cctggtggaagaggacgggaacttttatttcctcctggttgtgtagaagctactcaacca
ttattgataaaaagacgcaagtacaataaaacagacattcagcctgtcgatggttggaga
ttagttatgactcttaaatcgggactgttgatggagtcaacttgggcactagatgcttta
aatattcttctttatgacgacaatgcttttacttattttggacttagtaatatgccagga
ttactggaggctattttagagcattggagatcttctttgctctcaatgtttaatattaca
gacgatctcgagttggaggattcgacttgccgacaacaagttcgaaaaagaggtcaccag
gtttccatcgattatttatcgactgtgcataaaaggaaggaagatggagttgatggtgaa
aaggtgatgagtgcgtgtagtgatgaaggctctatggatatggaattgggaatagctaaa
aatattgaattggatgacaaagtccaaattttaacgggttttaattatacaaaaaagcca
cggtttggcttagaagacagtggtgaatattctgttgataagaaagatgaagaaattttt
gtgacagatgaagatcgtatttgggatttgtctgaaaggagctcttacgatataaatggg
tatgaacactggagacaaggaggtggaaatactacaaaacatataatcacccactatgct
tctggagatctcggattggttccttttgttcgtgttttaaaagatttatctactaaaaaa
cctcttcaatcctcgtcaccacctgcaccaccacagccactaccactaccccgacctgag
gaaccatctcctataacattaaatggagaaactcaaaatagtgatgtagaagatggtcag
gatcatcctaaagaagaagacgaggatataattgatcgaattaagcgagttacaggaatc
gttttccgggatcctaatgaagctcgaacgcgttggacaactaaaaatttggaagatgaa
aactatatgagagacgagcctagcttattgctaacgtctgattcccaggattctattggg
aaaaggtcattatgtatatctaccatactcaggaatctcagttttctaccgggtaacgaa
tatgaactaagtaaaaatgccacgtttttaacaatttgtgggcgtcttcttcttttgtat
cattggcatcctctaaggactgttaaacagcgtaattatgatcgaggcgaagacgatgat
acaggagaatcatgcacttctctaaatggtgactcagaatggtggtgggaatacttgcat
gttatacgcgaaaatgtcatggtatccatcgctaatatcgccggtgctttggaattaaag
cattttgacgaagtcattgttcgcccattattggacggtctattagaatgggccataagt
tcatctgcttatgctcaagacccattccccaatgttggtcctcattctccgatctctcca
cagagattagctatcgaagcgctgtgcaaacttagtttacaggaatcaaacgtggactta
atcttgagtactcctccctactcacgaattgagaaactgtgccgactactagctaaaaaa
ctttaccgctacgaggatcaagttttgagagaatttagcattaatttattatattattta
tctggagcgaattccggtgttgcccgaactatagctacagctgatacaaccatagggtta
cttttaggatttatagagcaagctgaacaaaatgcattggtcgtagcgcaacagcatgga
gtgaatgcattaagagacaatcctgattccatgggtacaagccttgatatgttgcggcgg
gctgcttccacgcttagtaatcttagtcaacatccggacaacataccgctgtttttaaga
caggaacaaagacttttatctctagtaatgagtcagattttggaccaaggtgttgaagca
attctctcaaatgttttgttcaacattgggaaaacatcctccccccctgttccttttatt
tcagaaaagacaagttctccaacaattgttacttcgactattaacaataataataagtgt
tcttcagttgagaataagtga
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integrated database retrieval system
