Lepeophtheirus salmonis (salmon louse): 121125445
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Entry
121125445 CDS
T08214
Symbol
Atg5
Name
(RefSeq) autophagy protein 5
KO
K08339
autophagy-related protein 5
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04136
Autophagy - other
lsm04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121125445 (Atg5)
04136 Autophagy - other
121125445 (Atg5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121125445 (Atg5)
03029 Mitochondrial biogenesis [BR:
lsm03029
]
121125445 (Atg5)
Membrane trafficking [BR:
lsm04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
121125445 (Atg5)
Mitochondrial biogenesis [BR:
lsm03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
121125445 (Atg5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_UblB
ATG5_HBR
Motif
Other DBs
NCBI-GeneID:
121125445
NCBI-ProteinID:
XP_040576577
LinkDB
All DBs
Position
10:complement(19204500..19207514)
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AA seq
273 aa
AA seq
DB search
MSEDREVLREIWEGKIPIRFNLDGDFGGVSEPFYLMLPRQSYLPLTLEKVRKHFSKHTES
PNADIWFSCNGSAIRWHLPVGLLFDSFMMGQETEDNDASFHLPWNLNVVFGEFPSEEIIR
FNSRESLETYFMSCLKEADQIKHGGRVLSKMQKKDQNQLWQGFQNDKFDQFWPINRRLME
IEGTGENEIGGFRHIPVRIYKGDGPMIQKIVNTLTEDKSKATIKDMLLEFLPDCDVDNLQ
FLTQGISPPLDTPIQWLSEHLSYPDNFLHICVK
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggatagggaggtgctccgtgagatctgggaagggaaaattcctattcgtttt
aatcttgatggagattttggtggcgtgtccgaacctttttacctcatgctaccgcgtcaa
tcctatcttcctctaacgttagaaaaggttcggaagcatttttcaaaacatactgaaagc
ccaaatgcggatatttggttcagttgtaacggatcagcgattcgatggcaccttcctgtt
ggccttctctttgattcattcatgatgggacaggaaactgaagataatgatgcatctttt
catttaccgtggaatttaaatgtggtatttggtgagtttccatctgaggagatcattcgt
ttcaactccagagagagtttagagacatattttatgtcctgcttaaaagaagcagatcag
atcaaacatggtggaagagtcttgtctaaaatgcaaaaaaaagatcaaaatcagctttgg
caaggctttcaaaatgataaatttgatcagttttggccgattaataggaggctcatggaa
attgaagggactggtgaaaatgaaataggaggtttcaggcacattccagtacggatatac
aagggtgatggtcctatgatccaaaaaatagtcaatactttaacagaagataaaagcaag
gccacaataaaagacatgctgctggagtttctaccagattgtgatgtagacaatttacaa
tttttaacgcagggcatttctccgcctttggacacaccaattcagtggctttcggaacac
ttgagctatcctgataactttcttcatatctgtgtcaaataa
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integrated database retrieval system