Lepeophtheirus salmonis (salmon louse): 121125539
Help
Entry
121125539 CDS
T08214
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121125539
03041 Spliceosome [BR:
lsm03041
]
121125539
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
121125539
Spliceosome [BR:
lsm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121125539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
Nup35_RRM_2
RRM_3
RRM_Nup35
Calcipressin
Motif
Other DBs
NCBI-GeneID:
121125539
NCBI-ProteinID:
XP_071747658
LinkDB
All DBs
Position
10:4054056..4271253
Genome browser
AA seq
382 aa
AA seq
DB search
MSTLMMPAATMTTMTNTAPIAVSQPKSDPNKMVGMINNSSKQEHYHIFVGDLSPEIETQT
LREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFTKKVEAESAITVMNGQWLGSRSIRTNW
ATRKPPTNRTEVNAKPLTFDEVYNQSSPTNCTVYCGGITTGLSEELLQKTFSHFGCIQEI
RIFKDKGYAFIRFATKESAAHAIVAIHNTDVNGLTVKCSWGKESGDPNNLPANSQLTIPQ
LVPGAQFPYSVTGTPHMAGFYYPQPMAAAAAQAAAQAAQTNYLPGLPGYTIGNFGSSYPQ
GYFSALPSMQVAAAASYGVPSQTAVSAATAAQLPPGQQAAAALAAQGLAATQQPGVVHVP
YPTAAPSVQQFQVNGQPTTIAL
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgagcacacttatgatgccagcagctactatgacgaccatgactaatactgctccaatt
gcagtctctcaacccaagtccgatccaaataaaatggttggcatgattaataacagcagc
aaacaagaacattatcacatttttgtgggtgatcttagtccggaaattgaaactcaaact
ctcagagaagcttttgctccatttggtgaaatatcggattgtcgggttgttagagatcct
caaacacttaaatcgaaaggttatggattcgtgtctttcacgaaaaaagtagaagcggag
agtgcaattacggtaatgaatggacaatggttaggctcacgctcaattagaacaaactgg
gccactcgtaagccacctacaaatcgtacagaagtaaatgcaaagccacttacttttgat
gaagtttacaatcaatctagtccaacaaattgcactgtatactgtggtggaataacaact
ggactctcggaagagctcttacaaaaaactttttctcattttgggtgtattcaagaaatt
cgaatatttaaggataagggatatgctttcattagatttgccacaaaggagtccgccgcc
catgcaattgtcgccatccataatacggacgtaaatggacttacagtcaaatgctcatgg
gggaaagaatctggggatcctaataatttaccagcaaatagtcaattgacaatacctcaa
ttggttcctggagcacagtttccatatagtgtaacaggtacacctcacatggctggattc
tattatcctcaaccaatggcggcggcagcagcccaggctgctgcacaagcagcgcaaaca
aactatctacccgggctccccggatatacgattgggaactttggatcatcttatccccaa
ggatattttagtgcactaccgagcatgcaagtggccgctgcagcctcatatggagttcct
agtcaaactgcagtctccgctgcaacagccgcgcaattacctcctgggcagcaagcagct
gcagcacttgcagctcaaggccttgcagctacacaacaacctggtgttgttcatgttcct
tatcccacagcagcgccctctgttcagcaattccaagtaaatggacagcctactaccata
gcactataa
DBGET
integrated database retrieval system
