Lepeophtheirus salmonis (salmon louse): 121125657
Help
Entry
121125657 CDS
T08214
Name
(RefSeq) protein polybromo-1 isoform X1
KO
K11757
protein polybromo-1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121125657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsm03021
]
121125657
03036 Chromosome and associated proteins [BR:
lsm03036
]
121125657
Transcription machinery [BR:
lsm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121125657
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
121125657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
DUF575
Motif
Other DBs
NCBI-GeneID:
121125657
NCBI-ProteinID:
XP_040576786
LinkDB
All DBs
Position
10:13867829..13884723
Genome browser
AA seq
1216 aa
AA seq
DB search
MIVFRMMKVTRMRMRMKMMRNFMMEKWANFSNILGIMMLRVLQFVNLFLILPSKKLFPDY
YQTISNPISLNMIRKKLKNKEYGKLSDMVNDMNIMFENCKAYNRSDSQIFKEGVKLQRLM
TSKVEEIQSGKVVPNGMIEIKETVVSPHFNSNSTHNIVALKNMRILYNTILIHKDDEGVQ
LVSAFMELPSKKDYPDYYEVIEHPMDMNTINNKIKNGAYKNEEEYLQDMKLMFANCKKYN
EERSEIYKDAVTLERVLIAKGREIGLSAGLGRGRPSKKKFLSSDSKNIKMKALFDALRDY
KDVKGRQLSLIFLRLPNQRDFADYYEVIKKPIDFEKISTKIKTYVYDNLEETLADFILMF
DNACKFNEPDSQIYKDALTLQSLALKVAREMNETAGSVTDVAQRVQDILNSIFIAVYNHQ
DENGRSFSDSMSEIPEYDIKIVNDQEVKTRALSLDIIKRRLDRVLYKRLDFFQRDVFSVF
ERARNLSTSDSLIFEDSVELQAFFIKVRDEFCERGTLLKSRALLYTQVHLDAAITALKAK
KFAIEKNNFPNEDLDNSESSKINGATNVLTVSLNSQEYKVGDYVYISSNVQENNLIYRIE
KMYSGEGILSFYGTQFLYPKDTHHLPTRKFLDREVFSSDVRKIINLSEVVGKCVVLTVKD
YLKYIPEGIHDDDVWVCESQYVTRNKYFTKLKTPYEFIKRNVNLKIRESSIVLRRIPSVY
KHRVERQKAELEEIEAMEKSLGNIIPPNVLWNPIPFDYPLPQPLDEGITYFEQYTIPGPI
TLKRGDNVYVRAENGKNLIVQIDTMWTTSDGMAYFHGPWFVTPSETPQNPSQSFYKQEVF
LSTISDTNPLLSAVGKCTVFEVTDYTTRRPSEVVEGDVYVCESIFDETKRAVRGLLPPTG
LKKYSFNSGSVQEDEIYFFKKPIHIQKVPERVVNPLPPTPKMSLSNNFEVDNEDSLDGIS
SVCSNTSVVEPTPKKNKGPSKKIVTAYTVYSSDKRKLVFESNKECTFGEISRIVGDQWKQ
LSDLEKQVYEERAKKVNKENEIKFLQEQRAFEEKKRQELMNHSGTSTPISFGNNGNITFN
AMPSTPASSKNALSMISINNTNQRNFNCISPAPSPGPPVMTNTKVIEPIFHTVPPRPQKL
LHSEAYIKYIEGLTTESHSMSNWERQLQATKENTKTDEAQLPAHWLSDNGQHGTSLDALW
ALREFMMSDSLGIYKL
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgatagtctttcggatgatgaaagtgacacggatgaggatgaggatgaagatgatgagg
aactttatgatggagaaatgggcgaacttttcaaatatattaggaattatgatgttgcgg
gtcttacaatttgtgaacctttttttgattcttccttcaaagaaactttttcccgattat
tatcaaaccatatcaaatcctatatcgcttaacatgattcgaaaaaagttaaagaacaaa
gaatatgggaagttatctgacatggtaaatgatatgaacataatgtttgaaaattgtaag
gcatacaatcgatctgactctcaaattttcaaagagggagttaagcttcaaagattgatg
acttccaaggtggaagaaattcaatctgggaaagtggttccgaatggaatgattgaaata
aaggaaacagttgtttcacctcattttaattcaaattcgactcataacattgttgctttg
aagaatatgcgtatcctctataacactattttaatacataaagatgatgaaggagttcag
ttagtatcagcatttatggaattaccgtcgaaaaaggattatccagattattacgaagtc
atagagcaccccatggatatgaacacaataaataataagataaaaaatggcgcctacaaa
aatgaagaagagtacttacaggatatgaaattaatgtttgccaactgcaaaaagtataac
gaagagagatcagagatttacaaggatgcagttacacttgaaagagtattaattgctaaa
ggacgtgagattggtctctctgctggtcttggaagaggaagaccatcaaagaagaaattt
ttgtcgagtgatagcaaaaatattaagatgaaggctttgtttgatgctctaagggactac
aaagatgtaaaaggaagacagctttccttaatttttcttcgattaccaaatcagcgtgat
tttgctgattactatgaggtaattaaaaaaccaattgactttgaaaaaatcagtactaaa
atcaagacttacgtgtatgataatttggaagaaactttggctgactttatcctcatgttt
gataacgcttgcaagtttaatgaacccgattctcaaatttacaaagatgcattgactctt
caatctcttgccctgaaggtggctagagaaatgaacgagactgctgggagtgttactgat
gttgcacaaagagttcaagatatcttgaattctatatttattgctgtttacaatcatcaa
gatgaaaatggtagatcgttctccgactcgatgtctgaaattcctgaatatgacataaaa
attgttaatgatcaagaagttaaaactagagcccttagtttggatattatcaagagacgt
cttgatagagttctttacaaaagacttgacttttttcaacgggatgtattttctgttttt
gagagagcaaggaatttatctacctccgacagtctaatttttgaagattccgttgagttg
caagcatttttcatcaaagttcgagatgagttttgtgaaaggggaactctacttaagtct
agagctttactttatacacaagtgcatttggatgcagcaattactgctcttaaagcaaag
aaatttgccattgagaagaacaatttccccaatgaggacctagacaacagtgaatcttcc
aagataaatggtgctaccaatgttttgacagtaagcttaaactctcaggagtataaagtg
ggagattatgtatacatcagctccaatgtacaagaaaataatttaatttatcgaattgag
aaaatgtattctggtgaaggtattttatctttttatggaactcagttcctgtatccgaaa
gatactcatcatcttccaactcgaaaattcttggatagggaagttttctctagtgacgta
cgtaagattatcaacttatctgaagtagttggtaaatgtgttgttttaacagttaaagac
tatttaaaatatataccagaaggtatacatgatgacgatgtctgggtctgtgagtctcaa
tatgtcactagaaataaatacttcactaagctgaaaacaccatatgagttcatcaagagg
aatgtaaatttgaaaataagagaatcttctattgtactgcgtcgcattccgtccgtatat
aaacatcgggtcgaaagacaaaaagctgagctggaggaaatagaagctatggaaaagtcc
ttaggcaacattattcctcccaatgttctttggaaccctattccatttgattatccactt
ccacagccacttgatgaaggaattacatattttgaacagtacacgattccaggtccaatt
acattaaagcgtggcgataatgtttatgtacgggccgaaaatggaaaaaatctcattgtt
caaattgataccatgtggactacttcagatgggatggcttactttcatggtccatggttt
gttactcctagtgaaaccccgcaaaatccatcacaatcattttacaaacaagaagttttc
ttgtctactatctctgacacaaacccattgctctctgcagttgggaaatgtacagtgttt
gaagttactgactacacgacgcgaaggccttcagaggttgtagagggagatgtatacgtt
tgtgaatcaatatttgatgaaactaaacgggccgtgagaggcttgcttccaccaacagga
ttgaaaaagtattctttcaattccggtagtgtacaagaagatgagatctatttctttaag
aagcctattcacatccaaaaagttccggaacgtgtcgttaatcctctcccccctacgcca
aaaatgtccctttcaaataattttgaagtcgataacgaggattctcttgatggaatttca
tcggtatgttctaatacatccgtagtggagcctacacctaagaagaataagggaccgtca
aaaaagattgttacagcctatacagtatactcaagcgataaacggaaattagttttcgaa
agtaataaggagtgcacttttggagaaataagtcgtattgttggagatcagtggaagcaa
ttatctgatcttgagaaacaagtatatgaagaaagagcgaagaaggtcaacaaggaaaat
gaaatcaaatttcttcaagaacagagagcgtttgaagaaaagaagcggcaggagctgatg
aatcacagtggaacatcaactcctatttcttttggaaataatggaaatatcaccttcaat
gcaatgccctccactcccgcttcatcaaaaaatgccttatccatgatttcaattaataac
accaatcaacgtaattttaactgcatttctcctgctccatctccaggtcctcctgttatg
acaaacaccaaggtcattgaacctatatttcatactgttcctccaagaccccaaaaacta
cttcactccgaagcttacatcaagtatatcgaggggcttactactgagagtcactccatg
tctaattgggaacgacaactacaagctactaaggaaaacaccaagacggatgaagctcag
cttcctgctcattggttatctgacaatggtcaacatggaacttcactggatgctctatgg
gccctacgagaatttatgatgtcagattctctgggaatttataaactatga
DBGET
integrated database retrieval system
