Lepeophtheirus salmonis (salmon louse): 121125766
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Entry
121125766 CDS
T08214
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsm03400
]
121125766
DNA repair and recombination proteins [BR:
lsm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
121125766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_4
Exo_endo_phos
UBA_8
Exo_endo_phos2
Motif
Other DBs
NCBI-GeneID:
121125766
NCBI-ProteinID:
XP_040576899
LinkDB
All DBs
Position
Unknown
AA seq
346 aa
AA seq
DB search
MDDDIIEVFASTSTDTKTKAQCPNQDIRRQLVGQFVETTKTDETVAGFYLDQFDWDLQIA
VTTFLDEFAEVKSSQTKDQDPEVEIRDTPRGDFSLVTWNVDGLSRANLKVRVKAVCKIIE
DTKVDIVFLQEVIPLTLNYFKEKLGNYIFVVGNEEDERLEYFNVICLRRFRIYMDSFQII
PYNYSVMGRNLLFVEAHIGKAKLILMNTHLESTKDHATTRIEQLKKCISIINKSASKETT
VIFGGDLNIRDKELTSLPPNFHDLWITNGSKKECNYTWDMTRNTNLEFPGRFKPRLRFDR
LYIKYNENYDVKSDFFGLIGIEKISGTQSFPSDHWGILTRFRISSS
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgacatcattgaagtatttgcttcgacttccacagacaccaaaacaaaggcc
cagtgtccgaatcaagatatccgtcgtcaattagttggacagtttgttgaaaccacaaag
acggatgaaacagttgctgggttttatctggatcaatttgattgggatcttcaaattgcg
gtcactacatttttagatgagtttgcggaagtcaagtcctcacaaacaaaggaccaagat
ccagaagtggaaattcgagatacacccagaggagatttctctctcgtcacttggaacgta
gatggactgagtcgtgcaaacctcaaggtccgtgtcaaggctgtatgtaaaattatagag
gataccaaggtggacattgttttcctccaagaagtcattcccttgactctaaattacttt
aaagaaaagttgggtaattacatatttgtcgtagggaatgaagaggatgagagactagag
tatttcaatgtgatttgtctgagaagatttcggatttacatggatagctttcaaataatt
ccctataactatagcgttatggggcgtaatcttttattcgttgaggcccatattggaaag
gctaagctcatactcatgaatactcacttggagtctactaaagaccatgcaacgacacgt
attgaacaattgaaaaaatgtatttctataatcaataaaagtgctagtaaggagaccaca
gtcatatttggtggggatcttaacatccgtgataaagaattaacttctctccctcctaat
ttccatgatttatggatcacaaatggctccaagaaagagtgtaattacacttgggacatg
actcgtaatactaatcttgaattccctggtcgcttcaagcctcgtctccgctttgatcgg
ctctatattaagtacaatgaaaattatgacgttaaatcagacttctttggactaataggg
attgagaaaatatcgggaactcagagctttccctcggatcactgggggattctgactcgt
tttagaatatcttcttcttag
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