Lepeophtheirus salmonis (salmon louse): 121125830
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Entry
121125830 CDS
T08214
Name
(RefSeq) uncharacterized protein isoform X1
KO
K24728
cilia- and flagella-associated protein 52
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lsm03037
]
121125830
Cilium and associated proteins [BR:
lsm03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
121125830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_EML
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
121125830
NCBI-ProteinID:
XP_040577005
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Position
11:complement(3978120..4006459)
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AA seq
707 aa
AA seq
DB search
MADKILLENSDGSVLPVNELPIVTAIGFTGSVQRGLIFDYDRRRVFYPLGKTIVLRSDAS
FTNYSSEECKSGFKAAPHSKGPQQKFLSQHSHNISTLALSSSGQFLISGELTPNITDKAE
VIIWNVEHNGEVLHRYRLHSVGVKCVQISPNDIYAASIGKEDPSVLLLKDLKSGALISGK
KVFGQPFVPMSLSFLPGRDDVLVVGGLDALVLWRVDEEKKLSCVRITFGKIKRSVSDLFV
KRVSKGESIAMCGTTSGDIVKVSLLVKDDYNDTGKDILSGSLLSCLIKKTPKKDARINAG
KFAGGVTCLQFFKDSDKMIVGTGCGELCIVQERARAGPSKNRTLNPGVPTKVSEPTQSHL
IELKTLSLSEFPITSIIQYDRSSLFVGTKNGDIFHIDTLTYYSPTLVSSSSSSTQINSLA
FPKGLDSICLATSSDGFRLWQLQSGTELLHVRPNESGGNNKCTVAEFSPLGDAILSGWSD
GSLRIFSPQSGSTLGVTGGVHPSGVSTLAFAANRGLIFTGGNDGQLRGWTLSSPSSWKLS
LSCTLRQHKKQIISLQVNNSGSECLSGSKDGTAVIWDVTIPSSIQRKRILVGSCSLVGAS
YHSSESQIITLSIDGRLSYWDTCKGIEIRSFIISHYGVTRALDVFKDFILTGTELSTLKI
RRYKAGDIIGVGRGHVGSISSLKMSPSGAWVVIGTEDGALIVFDVNL
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaaatactgctcgagaattctgacggatctgttttacctgttaatgaacta
ccgattgtaactgccatcggatttacgggaagtgtacaaagaggacttatttttgattat
gatcgacgtcgcgtcttttatcctcttggaaagaccattgttctacgatccgatgcgtct
tttacaaattattcttcagaggaatgtaaaagtggtttcaaggcagcccctcattccaaa
gggccccaacaaaagttcctatcccaacattcccacaacataagcaccctagctctaagc
tcttctggacagttcctcatctcaggggaattgactcccaacattacagacaaggcagaa
gtcatcatttggaatgtggagcacaatggagaagttctacaccgctatcgccttcattcc
gtcggagtgaagtgtgtgcaaatatcccccaatgatatctatgcagcttctatcggaaag
gaagatccaagtgtccttcttctcaaggatttgaagagtggagcacttatctctgggaaa
aaggtttttggacagccatttgtaccaatgtctctgtcctttcttccagggcgggatgat
gtacttgttgtagggggactggatgctctggtcctttggagagtggatgaagaaaagaag
ttgagctgtgttcgaattacttttggtaaaatcaagagatctgtgagtgatttgtttgtc
aaacgtgtttctaaaggggagagcattgccatgtgtggaacgacatccggggatattgtc
aaagtctcacttttagtgaaggatgactacaatgacacagggaaagacatattatccggc
tcattgctgtcttgcctcatcaaaaagacgcctaagaaagacgctcgaatcaatgcaggg
aaatttgctggaggagtgacgtgtttacagttctttaaggactcggataaaatgattgta
ggaacgggatgtggggagctctgcattgtccaagaaagagctcgcgctggtccttccaaa
aataggactcttaatccaggagtgccgacaaaagtatctgagcccacacagtctcatctc
attgagctcaaaaccctttctctttccgaattcccaatcacttccatcattcaatacgat
cgttcctccctctttgtcggcacaaagaatggagatattttccatatcgatactcttaca
tactacagtccaaccctcgtatcctcctcttcatcctccactcaaatcaattcattagcc
tttcccaaggggttagactccatctgcctcgctacatcctctgatggtttccgcttgtgg
caactccaaagtggtacagagttactgcacgttcgtccaaatgaatctggcggtaataac
aagtgtactgtggcagaattttcgcctcttggtgacgccatactctctggatggtcggat
ggctcactcagaatcttttctccacaaagtggctccactctgggcgttacaggaggagta
catccctctggagtatctactcttgcctttgcagcaaataggggattgattttcactggt
ggaaatgatggacagcttaggggttggaccctttcatccccctcctcatggaaattaagt
ctgagttgtactctcaggcagcacaagaaacaaatcatttccctgcaagtgaataattca
ggctctgaatgcctgagtggatcgaaagacggtaccgccgtaatatgggacgtcactatt
ccctcctccattcaacgaaaaaggattcttgttggaagttgctcccttgtgggagcctcc
taccattcttctgagtctcaaatcatcactctatccattgatggacgactatcctactgg
gacacatgcaagggaattgagatacgctccttcattattagccactacggcgtcaccaga
gctctggatgtgttcaaggactttatccttacaggcaccgagctttcaaccctcaaaata
cgcagatacaaagcaggggacatcattggagtcggacgagggcatgtaggctctatttct
tcacttaaaatgagtccatctggggcatgggttgtcattgggacagaggatggggctctc
attgtctttgatgtgaatctttaa
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