Lepeophtheirus salmonis (salmon louse): 121125868
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Entry
121125868 CDS
T08214
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04120
Ubiquitin mediated proteolysis
lsm04137
Mitophagy - animal
lsm04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121125868
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121125868
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121125868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsm04121
]
121125868
Enzymes [BR:
lsm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121125868
Ubiquitin system [BR:
lsm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
121125868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
zf-RING_14
Zn_Tnp_IS91
zf-C3HC4_3
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
121125868
NCBI-ProteinID:
XP_040577057
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All DBs
Position
1:complement(35627690..35642284)
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AA seq
476 aa
AA seq
DB search
MSGNIKSGNLMSVFLGSESHSNMPLRPTRDYSITSSSPSSYRQYADSYTPSMSSYSSPSL
LRSASSTSFFPMSSSTSYTPSYNISSSTPNRPFRSRFLRSSKADYYGIAEKEEDNQGSRT
NDSHSERLSSRNADSPSRKNPNLHGGVLNNGSVLLRMNSRAESSDEDSEEEERSNHLDGV
EEVEEEEEEDPLDVEERDLIQKLSNKDSLSYTEECELRKKLFDLKTIKFKKNQQQNEEGV
THKFQKXANEISDTKSTAKEEEKKILVKRLGSSEINEVEQKDIQVRLQEILRDQKTEIEG
SIQTIESHYEHILEETTTELTEIESSIRGKNQLVEKLQEEILSMNVRKEVLNEEIESLHT
SHGTSLTRFEEIVSLIDTDISKYSVLVPVQRKPSNANRLDEDELKELEGELECPVCMDIS
RPPIYQCEEGHIICSTCKPLLINCPHCAKKYSEPPIRCRFAEKLSLRYFSIAQDTP
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaaatatcaaatctgggaatttaatgtccgtttttcttggatctgaaagtcat
agtaacatgcctcttagacctacaagggattattccattacatcgtcctctccatcatca
tatcgacagtatgctgattcttacacaccatccatgagtagttacagctcaccctcactc
cttcgctctgcttcatcaacctccttcttccccatgtcctcatctacatcctatactcca
agctataatatatctagtagtacacctaatagaccatttcgcagtcgatttcttcggagt
tcaaaagcggattattatggaattgctgaaaaggaggaagataatcaaggctcgcgtaca
aatgatagtcacagcgaacggttaagctctagaaatgctgattctccttctagaaagaat
ccaaacttgcatggcggcgtgctaaataatggatctgtgcttctgagaatgaacagtcgt
gcagagtcaagtgatgaagattcagaagaagaggaaaggagtaaccatcttgatggagtt
gaggaggttgaagaagaggaagaagaagatccattggatgtggaagaaagagatttaata
caaaaactctcaaacaaggactcactctcatacacggaagaatgcgaacttaggaaaaaa
ctgtttgatttaaaaactattaaatttaaaaagaatcagcaacagaatgaagagggtgtc
acacacaaatttcaaaaantagccaatgaaatatccgatactaaatccacagccaaggaa
gaagaaaaaaagatattggtcaaaagactcggctcatctgagatcaatgaagtagagcaa
aaagatattcaagttcgtcttcaagaaatcctccgtgatcaaaagactgagattgagggt
tctatacaaaccatagagagccattacgaacacattcttgaggaaactacaacggaatta
acagagattgagtcttccattagggggaaaaaccaattggttgagaagctccaggaagaa
attctttcaatgaatgtgagaaaagaagttttgaatgaagaaatagaatcccttcacaca
tcacatggaacgagtcttacaagatttgaagaaatagtgtctttaatagacactgacata
agtaaatactctgtccttgttccagttcaaagaaaaccatcaaatgctaacagattagat
gaagacgagctcaaggaactggagggagagttagagtgtcctgtatgcatggatattagt
cgaccccccatatatcaatgtgaagaaggacacatcatttgttctacttgcaaacctcta
ctcattaactgcccacactgtgccaaaaaatattccgagcctccaattcgatgtaggttt
gctgaaaaactatctttgcggtatttttccattgctcaagatacaccttaa
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