Lepeophtheirus salmonis (salmon louse): 121125914
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Entry
121125914 CDS
T08214
Name
(RefSeq) uncharacterized protein
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsm01009
]
121125914
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121125914
Protein phosphatases and associated proteins [BR:
lsm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121125914
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
121125914
mRNA cycle factors
Stress granule specific factors
121125914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Dicer_dsRBD
YagK_YfjJ_C
DND1_DSRM
Flu_M2
dsRBD2
Motif
Other DBs
NCBI-GeneID:
121125914
NCBI-ProteinID:
XP_040577108
LinkDB
All DBs
Position
11:complement(13699541..13704582)
Genome browser
AA seq
538 aa
AA seq
DB search
MTSFSDWCYGYTPSSNYQSDGNGYGMYEENRTYYQENPTYYGANPPSNNNYQDNYSNNST
TYQKSPPNNFNQNNGSNIYQNNPMHNYQKYPNGPNNYQVKKTSSPVVNSTQSACARLHNY
ALQNNLLESYSTVNQNGGYVVTLTLGNQQFLGNGTNLKMAKEAAASQALRETSYIENDVQ
YKSSNSGTTATSQLHEIATKKGVNVEFKFIEPYNFKFKSSMRAWAKTDIMSSYKVHLKVA
SYDFYGQADHPQKAKHIASNEALAYVEALPDIPKAKTTVVDGLLEGKNVIMALNEIAMTN
GLCPEWNMVSDQGLPHQRTFTWSLKLGDHEVVGTGSSKKVAKTTAANQMLNIIPEEWKKA
VLEMDGKKKKKANKRKSGSASNNPDNSNKTEPEEEGAHPVKKANLSSPENPSLDKVTTPL
KAEVPVKVEDNSTPLSATTDIAQLPSNLPIFEQITSSNPISCLYEYCKKAKFDDPVFECV
SENVVETWLKGQQTLKKTEYNMKLIVKDKTYYESGSNKKLAKNNVATKAWNNIRAGID
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgacctctttcagcgattggtgttatggatatactccgagttccaactaccaaagtgat
ggtaatggctacggtatgtacgaagagaatcgtacgtactaccaagagaaccccacgtat
tacggagcgaacccccccagtaataataattaccaagataactactcaaataactccacc
acttaccaaaaaagccctcctaacaactttaatcaaaataatggttctaacatctaccaa
aataaccccatgcataactaccaaaagtaccccaatggaccaaataactaccaagtgaaa
aagacgtcgtcccctgtggtcaactccacacagtccgcctgtgcaaggcttcacaactat
gctctccaaaacaatctcctggagtcttactccaccgtcaatcagaatggaggctacgta
gtcacactcactcttggcaatcaacagttccttgggaacggaactaatcttaaaatggct
aaagaggccgccgcgtctcaagcattaagggaaacatcatacattgaaaatgatgttcaa
tacaaaagctccaactccggcacaacagccacctcccaacttcacgaaattgccactaaa
aaaggagtcaatgtggaattcaaatttatagagccatataactttaaattcaagtcctca
atgagagcatgggccaagacagacatcatgtcgagttacaaagttcatttaaaagtagct
tcttatgacttctatgggcaggcagatcatcctcaaaaagccaaacatattgcttctaac
gaagcacttgcatatgtagaagccctacctgatataccaaaagctaaaaccactgtggtt
gatggtttactcgaaggaaagaacgtcatcatggctttaaatgaaatagcaatgactaat
ggactttgtccagaatggaacatggtttcggatcagggattacctcatcaaaggaccttt
acttggtcattaaagttgggagatcacgaggtcgttggaactgggagctcaaaaaaggtt
gccaaaacaacagcagctaatcagatgttgaacatcattccggaggaatggaaaaaggct
gtactagagatggatggtaaaaagaagaagaaggcaaacaagagaaagtcaggctctgca
tcaaacaatccagacaattcaaataaaactgagccagaggaggagggggctcatcccgta
aagaaagcaaatctgagtagtccagaaaatccttccttggataaagtaaccaccccattg
aaggcagaagttccagttaaagtagaagataattctactcctttatcagctacaacggat
atcgcacaacttccctctaacctgcccatctttgagcaaattacctcatccaatcccatc
tcatgtctctatgagtactgtaaaaaggctaaatttgatgatcctgtctttgaatgtgtg
agtgaaaacgtggttgaaacatggctaaagggtcaacaaactcttaaaaagacagaatac
aacatgaaactcattgttaaagataaaacctactacgagtctggatctaataaaaaacta
gctaaaaacaatgttgctaccaaagcatggaacaatatccgtgctgggattgattag
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