Lepeophtheirus salmonis (salmon louse): 121125930
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Entry
121125930 CDS
T08214
Symbol
Strump
Name
(RefSeq) WASH complex subunit 5 isoform X1
KO
K18464
WASH complex subunit strumpellin
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121125930 (Strump)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121125930 (Strump)
Membrane trafficking [BR:
lsm04131
]
Protein recycling
Others
WASH complex
121125930 (Strump)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Strumpellin
CPSase_L_D3
Motif
Other DBs
NCBI-GeneID:
121125930
NCBI-ProteinID:
XP_040577130
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Position
1:complement(35861785..35865796)
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AA seq
1156 aa
AA seq
DB search
MDLLDENNECGQALLTLTSRGNYILYELFSLKDAVPSIYSLNPSRGEVSQYGLLLNLDFQ
YFQSTKKMEDLIRSNENLCDLDDSLKDSYSKILTRFYKFFDSIISYTLDLKKFISDCGNG
VYLQVCLDSLMTDPDGKQLLCEALNLLGVVLLLTDKLFPGPIRERLLVAYNRYTGGHTDR
IDDVCKLLRSTGFVYQAGKRPPDYPECFFKRTNIPESFIRIVISRLRLDDIYNQMSSFPE
HRSLALSSQGSMMIICLFFAPHILKEDKLAMREIVDKFFFDSWVTTYYMGNIINLVHYWE
PYPAAKSALSNTIQTHLIREITKSMSESLKKLVSKSTELLNDGVLTEEELMDKSVQILDM
IRKCNYALRWIMLHTSPLPLNPTKKSRQLRDDIMLEFEGKKYDTFILLLNTASLELKIRR
IHQDLISKREEKWTFCQNECESRMLELSKVFAGELKLSRVSKNTNLEKWFYNRKKEISNL
NLEDPLKSGRIAMKLIRALKESTELGQMDSNLQVKQYVMDSIEYLTQIVRYAGVKEEFLV
LLQVISDFQYGWEIIDHFTPLIQEEVINDPSIVKRLQAIFIKISSVIETPILRISQIESK
QLTLVSNYYSVEIVQFIQNVLQIIPKSIFELLIKVLEIQSVQEFDMPSRLDKDQIKSYAL
LDERYEIAKLTHDISTFADGMMTMNNSLIGVIRINAKNLLIEGMRKELVQRVCFFCNKLF
SSCNKSKSLNFRLIDKIQELKTFMQGMSKSFEYVQDYINIPGLCIWQEEMSRIINFYVEQ
ESNLFLKHKVPQVESAYQSKTIPIILYPSLEDGKGLTFVGYLAQELLNLIDPFQIVFVNG
KQKWYDVKSKTDICSLSLFSSLFSALGSYGMAGLDRLIGLKAVVCLQNLISHLIKNNPCS
KEWSLLLKQFDELNHMHKSHDFIRLSKTLLTSKASKSLLSTFLHFFCNMGSFQILRLQIS
YQLKLKCNFNSKPLYSAVKNLNESLLEEEKRRMIEEASSSVKSKLPSQSNLLQQFSHYLQ
WSGLLDPLKAIYIIPDQINLLPEFIFLLIISVSSRLSFIDRVGNSPIIRKPGDHIDGNTL
VLGISCFLNQFPIELSRKVFLYLGNYLTSVISITGQVNQDALTIKVVLQLLIHQSRLANK
IMITPAALTEHCLFKL
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atggatttgttagatgagaacaacgagtgtggacaagcacttcttactctaacttccaga
ggcaattacattctttatgaattattttctttaaaagatgccgtaccctccatatacagc
ctcaatccatccaggggagaggtctcacaatatgggctcttactcaatcttgatttccaa
tatttccaatctacaaagaaaatggaggatctcatccgttccaatgaaaacctttgtgac
ttggatgacagtctgaaagattcgtattcaaaaatacttacaaggttctataaattcttt
gattccattataagctatacactcgatttgaagaaattcatttccgactgtggaaatgga
gtatatctacaagtttgcttggactctttaatgactgatccggatggaaagcaactcttg
tgtgaagctcttaatcttctaggagtcgttttactcctcacagataaactctttccagga
ccaattagagaaagacttctggttgcatataatagatatacaggagggcatactgatcga
atcgatgatgtttgtaaactattgagatccaccggatttgtttatcaagcagggaaaagg
cctcccgactatcctgaatgttttttcaaacgaacaaatattccagagtccttcataaga
attgttatttctcgattacgtttagatgacatctataatcaaatgtcttccttcccagaa
catcgttctttagcattgtcatctcagggctctatgatgattatttgcctattttttgca
cctcatattttgaaggaagataaacttgcaatgagggaaatcgttgataaatttttcttc
gatagctgggtcacaacttattatatgggtaatattatcaatttggttcattattgggag
ccttatccggctgccaagtctgctctttctaataccatccaaacgcatcttattagagaa
ataaccaagagcatgtctgaatccttaaaaaaactggtttccaagagtacggagttacta
aatgatggtgtacttacggaagaagaacttatggataaatccgtgcaaatacttgatatg
attagaaaatgtaactatgcacttcggtggataatgctacatacttcaccgttgccttta
aatccaacaaaaaaatcacgtcagctccgtgatgatatcatgttggaatttgagggtaaa
aaatacgatacatttatcttacttctaaatacagcctccttggaattaaaaattcgtcgt
atacatcaagatttaatttctaagagagaggaaaaatggactttttgccaaaatgagtgt
gaaagtcgaatgttagaactttcaaaagtttttgcaggagaattaaaattgagccgtgtt
agcaaaaacacaaacttggagaaatggttttataatcgaaaaaaggaaatttctaattta
aatttggaggatccactgaagtctggaagaatagcaatgaaattgattcgagctcttaaa
gaatctactgaactagggcaaatggattccaatttacaggtaaaacaatatgttatggac
tccattgaatatttaacccaaattgttcgctatgctggtgtgaaagaggaatttcttgtt
ttattgcaagttatatctgattttcagtatggatgggaaattatagatcactttacacca
cttattcaagaagaagttataaatgatccctcaattgtaaaacgtttacaagcaattttt
ataaagatttcttctgtaattgagactcccattcttcgtataagccaaattgaaagcaaa
caattaacccttgtctcaaattactattcagtagaaatcgtacaatttattcaaaatgtg
ctacaaataattccaaaatctatttttgaacttttaataaaagttttggagatacaatct
gtccaagagtttgatatgccctcaagattggataaagatcaaatcaaatcttatgctcta
ttagatgaaagatatgaaatagccaaattaactcatgatatatccacatttgctgatgga
atgatgacgatgaataattccttaattggggtcattcgaattaacgcaaagaatctacta
atagaaggaatgagaaaagaattggttcaaagggtttgcttcttttgtaataaactcttc
tccagctgtaataagtccaaatcgctcaattttcgattgattgataagatacaggaactt
aaaacttttatgcagggtatgagtaagtcgtttgaatatgtacaagattacattaatatc
ccgggattgtgtatatggcaagaagaaatgtcacgtatcataaatttctatgttgagcaa
gagtcaaatttatttttgaagcataaagttccccaagtagagagtgcttaccaaagtaaa
acaataccaatcatcctatatccttcattggaggatggaaaaggattaacatttgtaggg
tatttagctcaagaacttctaaatctaattgatccatttcagatcgtttttgtgaatgga
aaacaaaaatggtatgatgtaaagtcgaagacggatatttgttccctgtctttattttca
tcacttttttctgctttgggaagctatggaatggcaggtttagatagactaattggactt
aaagccgtggtatgtttgcaaaacttgattagtcaccttatcaaaaataatccttgctcc
aaagagtggtcacttttattaaaacaattcgatgaacttaatcatatgcacaaatcacat
gactttattcggctaagcaaaactcttttaacttcaaaggcctcaaaatccttattatcg
acttttttgcattttttttgcaatatgggatcctttcagatcttgagacttcaaatttca
tatcaactaaagctgaaatgtaattttaactcaaaaccattatattctgctgtcaaaaat
ttgaatgaatcattattggaagaagaaaaaagacggatgatcgaagaagcgtcatcaagt
gtgaaaagcaaattgccttctcaaagcaatttgcttcagcaatttagtcattatcttcag
tggtcaggtcttttagatcctttaaaagctatttacattatacctgatcaaatcaattta
ttacccgagtttattttcctactcatcatttcggtttcatcaagactctcatttatcgat
agagttggaaattctccaatcattcgtaaaccaggggatcacattgacggaaataccctt
gttttggggatttcatgctttttaaatcaatttccaattgaattgagcagaaaggttttt
ctatacctcggaaactatcttacatctgtcatatcaatcacaggacaagtaaaccaggat
gctctcactatcaaagtcgtactacaattactcattcaccaatcaagacttgcaaataag
attatgattaccccagcggcacttacagagcattgtctttttaaattatag
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