Lepeophtheirus salmonis (salmon louse): 121125976
Help
Entry
121125976 CDS
T08214
Name
(RefSeq) uncharacterized protein
KO
K10275
F-box and leucine-rich repeat protein 9
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsm04121
]
121125976
Ubiquitin system [BR:
lsm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121125976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
F-box
F-box-like
LRR_At5g56370
LRR_6
LRR_RPS2
LRR_EndoS
LRR_8
LRR_Zer-1
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
121125976
NCBI-ProteinID:
XP_040577183
LinkDB
All DBs
Position
11:18068706..18071904
Genome browser
AA seq
650 aa
AA seq
DB search
MEWLPSECLASIFQYLSLSDRLRCRCVSSRWKRILLEWSLLNEGRFLIRKDTQWTPFFSE
GCPYLFHSIKFLHLESVSISYDRYRHQWDALTPRLRGLVLQSSDISSTDFISILSGCVNL
RSLHLVRLRDLFLSGVVLNKEQDVSRLALSLSKLRDLNLSENRYMSDFIFSRLVHCAKEL
ESLDISGCNILNGACAPTSVFTFPELFRRIAQGGCHQLKTLNLSSTGLDDKGLFELSELS
SNLSLKNINLSSCSGISGEGLLRLLESQTGLETLNLDHCHRWMNISTEDRVCQIALRLAK
IPNVSLAGLYIPDEWNSSSKKLFQALSKGNLWRQLNVSGVRVPGESLIHSFTTGGVLCNL
RYLLMSNFSSCFSSERLLTFFGSCRDLRILNLSGVENVTDSVLTLIFSRLKDLESLNLNG
CVQVTDIGLGIQETPQIMQSPRSDADSKIHKRELTDVFIDDVEDDIVTIKNLTKLRELFI
SSTKVTSSSIRNSFFFKDLSKIDVSYCFSLDDSSFVFLGDQCPLLQHVIAKKCNITDVGF
IALTKRLKILSEIDVEGNQYLSSHALDDLPLTCRYLKVLNISHCYKISQDAVARVEEAFF
NLTLYRHMYSTYQMMNENFNDPILLYKKSKKFEPWKLFCCVSKPSPQLQD
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggaatggctcccttccgaatgtctggcttccattttccaatatctctcactgagtgat
cgtctccgctgtaggtgcgtttcctcccgatggaaaagaattctcctggagtggtccctc
ctgaacgagggacgcttcctcattcgaaaagacactcaatggacacccttcttctctgaa
ggctgtccctacctcttccattctatcaagtttcttcatttagagtccgtctccattagt
tacgatcgctaccgtcatcaatgggacgcgctcactcctcgtcttcgaggtcttgttctt
caatcctctgacatttcatcaactgactttatttctattctgagtggttgtgttaatctg
agatccctacacttggttcgtctgcgtgacttatttctctctggagtcgtgctcaacaaa
gaacaggatgtttcacgcctggctttgagtttaagtaaactacgagacttgaatctatcc
gaaaatcgatacatgtcggattttattttctctcgtctcgtccattgtgctaaggaactg
gagtccttagatatcagtggatgcaatattctaaatggagcctgtgctccaacctctgta
tttacgtttccagagctatttagaagaattgctcaaggaggttgtcatcaattaaagaca
ttgaatcttagttccactggattggacgacaaagggctcttcgagcttagtgaactctca
tctaatctatccttgaaaaatataaatttatccagctgctctggcataagtggggaaggg
ttgctgagactcttggaaagtcaaacggggttggaaactctcaatttggaccattgtcac
agatggatgaatatctctacagaggacagagtttgtcaaattgcattgcgattagccaaa
attcccaatgtgtccctagctggtctttatattccagatgaatggaattcctcttctaaa
aagctatttcaagcattatctaaagggaatttatggagacaattgaatgtgtctggagtc
cgtgtccctggagaatcccttattcattcattcacaacgggtggagttttatgtaatttg
agatatttactaatgtccaacttttcatcctgtttttcttctgagaggctcttgaccttc
tttggatcatgcagagatttgaggattttgaacttgagtggagttgaaaacgtgacagac
tctgttctaaccctcatattctctcgcttgaaggatttagagagcctaaatctaaatgga
tgtgttcaagtcacagatattggtcttgggattcaggaaactccacaaattatgcaaagc
cctagatctgatgcagattccaagatccataagcgagaattgacggatgtatttattgat
gatgttgaggacgacattgtcacaatcaaaaatttgaccaaacttagggaattgtttatt
tcgtcaactaaagtcacttcatcctccattcgtaattcatttttcttcaaggatttgtct
aagatagatgtaagctactgcttctccttggatgactccagttttgtcttcctcggagat
caatgtcctctattgcagcatgtcattgcaaagaaatgcaatatcacggatgtggggttc
attgctctcactaagcgactcaaaatcctatcagaaattgatgtggaagggaatcaatat
ctttcgagccacgctcttgacgatctccctctcacttgtaggtacctaaaagtcctcaac
atttctcactgctacaaaataagtcaagatgctgtggccagagttgaagaggccttcttt
aatttgactctctatcggcatatgtactccacgtatcaaatgatgaatgaaaactttaat
gatccaattttactctataaaaaatcaaaaaaattcgaaccctggaaactattctgctgt
gtctccaagccaagcccacaattacaagattga
DBGET
integrated database retrieval system
