Lepeophtheirus salmonis (salmon louse): 121126058
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Entry
121126058 CDS
T08214
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 4
KO
K22991
WD repeat-containing protein 45
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121126058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121126058
Membrane trafficking [BR:
lsm04131
]
Autophagy
Other autophagy associated proteins
Others
121126058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML
ANAPC4_WD40
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
BCAS3_WD40
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
DUF5711
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_IFT80_2nd
Beta-prop_NUP159_NUP214
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
121126058
NCBI-ProteinID:
XP_040577278
UniProt:
A0A0K2U2T5
LinkDB
All DBs
Position
11:19840167..19841844
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AA seq
357 aa
AA seq
DB search
MSQSRLGLAEGWGHIRSIRFNQDGSCFVCAFDDGIRVYNTEPVREKAHLKKADTFGSIEI
AEILYRTNLIAMVSSSGGVYAENAVMIYDDLQSKMVLEFTFPEGVVNVKLRRDKLIAITP
KAIHVFSFPQNPQRLYTLETRDNPRGLCDASPAKAERGIMIFPGYKPGSLQIVDLDTTEQ
KSSSAPVTLNAHKTELWCLALNTKGNLIATASKKGTLIRIWDSLRRVMLVELRRGSDQAD
LYCINFSSDDQWLCCSSDKGTVHIFALQDYKLNKRSALSSLGIPGAYAGSQWSLANFTVP
QECACVCTFGKQGYIYAVCLDGSFHKYHFCPDGVCNQNAYDVITELCEDCDWENMRR
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaatcccgtttgggattagcggaaggatggggtcacatccgttctatccgcttt
aatcaagacggatcctgctttgtatgcgcctttgatgatggaatacgagtttacaataca
gagccagtacgggaaaaggcccatttaaaaaaagcggatacctttggatcaatcgaaatc
gctgagattctctatcgaactaacctcattgcaatggtctctagttcaggaggcgtatat
gcagagaatgccgtcatgatctacgatgatcttcaatccaaaatggtcttggaatttact
tttcccgaaggggttgtaaatgtcaaacttcgtagggataaactcattgccattactcca
aaggcaatccatgttttttcatttcctcaaaatccacagagactctatacacttgaaaca
agagataatcctcgaggactctgtgatgcgagtcctgcaaaggctgagagagggatcatg
attttccctggctacaaacctggatccctacaaattgtagatctggacactacggaacaa
aaaagtagttctgctcctgtaactctgaatgctcacaaaactgagttatggtgtttagcc
ttgaatacgaaaggaaatctcattgccacagcttctaaaaaaggaactttaattcgaatt
tgggattcacttcgacgagtcatgctcgttgaattgcgaagaggctctgatcaagcggat
ttatactgcattaattttagttctgacgatcaatggctttgttgctcttcagacaaaggg
actgtacatatatttgccctccaggattacaaactgaataaacgttctgcattatcttct
ctagggattcctggtgcttatgcaggttcacaatggtcgcttgcaaactttactgtgccc
caagagtgtgcttgcgtttgcacatttggcaagcaaggatatatctacgctgtttgcctg
gacggatctttccacaaatatcatttctgtcctgatggcgtttgtaatcaaaatgcctat
gatgttataacagagctttgtgaagactgtgactgggaaaatatgagacgatga
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integrated database retrieval system
