Lepeophtheirus salmonis (salmon louse): 121126207
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Entry
121126207 CDS
T08214
Symbol
Spt6
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsm03021
]
121126207 (Spt6)
03036 Chromosome and associated proteins [BR:
lsm03036
]
121126207 (Spt6)
Transcription machinery [BR:
lsm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
121126207 (Spt6)
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
121126207 (Spt6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
Tex_central_region
Tex_YqgF
Spt6_S1
HHH_9
HHH_3
Tex_N
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
121126207
NCBI-ProteinID:
XP_040577453
LinkDB
All DBs
Position
11:14459622..14465910
Genome browser
AA seq
1765 aa
AA seq
DB search
MADFMDQEAVEDSEEEMSAEESSSRRPKGKKKKKHSRQLSSDEEEEEEDEDEEKAREDMK
GFIDDDDDGVEEEKESESGSDTGESSSRRRKKKRRKRRSEDEEDIDEEDMELLQENLGIK
IQKKRKRIRMGSGSEEDSDGESRIASQRSSGDSEGEAHDKRSSSGKNKSIRASSVATSSK
AGFIDSEEEAEKAMEEDEDDGFIVDEDGVPIQKRRKKKKTHIFEDSARQLAEDIFGVAFD
YEEFEDDRVEEESDDEEEDDYDDEEAAEARRLKKLKKQKRKSAKTIFEIFEPRELELRHF
TDLDNEVRNTDIPERMQLRSIPVTSVPEGSDELDREAEWIFKYGFIKPTISKQDGYSRDD
CQEWVRKDRTVEKIKKALDFMRQQFHEVPFIAFYRKEYVEPELKINDLWRVYFMDENWCQ
LQSRKKNLRKLFKSMQNWQGEQLVADMDKPIPEGMRILSNEDLQNIDNIESYEELKDMDL
FFKLYYSKDLEAMQIAIKQKRREAREAKRSNRKKKTKIITNEDGEEIQVTDEESPVLDSE
DSGTDDQDLLRQASKNDPYSICRKYGLIGMSKRFGLTPEQFAENLRDGYQRHDLDQEPSE
PLEVAAEYVNQKFKDPNDVLKAVKFVVATQLSREPEVRRVTREIFNERATICVAPTKKGL
TEIDESHYCYSMKYLKNKLVRNLSGTQWLNLTAAEDQKLITITIATEIPSLSGNKQRNHL
EEAKELYKHDGFSKHVTEWNNLRAECIETTFKEIIYPVLRQELRIRLTREAKDGVLRQCK
NKMYDYLKTAKYTVSFEEEDEDDWDSSGGCRVMSISYENDTDVASYAVCIGVNGEVIDFL
KMEALLMRSNISQDSKRNRPSGDRRNKDVDMAKLKSFIIQKRPHVIVVGAIDRDAVRVRY
DVEAVVHELVEGEHQFPKIGVFLMDDNLAKVYSNSTRASQDFRDYPNVLRQGISLARRMQ
DPLIEFSQLAGPENEILCLNFHPLQNRLEEEELLEAINIEFINRTNEVGVDINECVSRPQ
TSNLVQFVGGLGPRKGAALLKTLRQMQSSQRLENRQQLVTLCHMGPKVLINCAGFIKIDT
TSLGDSEVYLEVLDGSRIHNEAYEWARKMAVDALEYDEEEGNPATALEEIINDPEKLAEL
DLDAFARELERQGFGNKSITLYDIRAELYHMYKDLREPYRPPDPEEIFNIVTKENPETFY
IGKLINATVSGFTYKKPQGEELDQAAPIRAGEENVWQCPFCGRDDFPELTEVWNHFDAGM
CPGKATGVKIRIDNGVSGFIPIKNLSDKQVINPEDRVKIGQTIFCRIVKINPERFSVECI
SKTSALVDKEHEWKPAKDDFYDEEAQARDMEQSTMKKKQQERQTYIKRVIVHPSFYNVGY
KEAERLIAGMDQSDVVIRPSSKGEDHLTVTWKVTDGIYEHIDVREEGKLNAFSLGQSLWI
GNEEFEDLDEIIARHINPMAAHARDILNFKYYRDTEGGKREVADEMLKADKAASPGKIHY
FLSVSKAYAGKFMLSYLPRTKTLHEFVTVTPDGFRFRKQVFETLSSLMKWFKEHFRDPLP
GTPNTPGRLTSRTPYMTGGTPGPGTITPGAMSLATGTPYGTTPGAMSNYGVSVNTPYTPS
GQTPFMTPYHTPGPSTTPRPSRGTPGPTPNRSFPTVPTPRSSSGGGGNVPSSGGRPSGGQ
SSHQQGRVRSSYSKSPAHGHRGGDSWQAALDAWPGGSSRRTPRQGDGSNTPRGFDGRQKT
PKYGGNNTPKRTPKAFGDATPLYDE
NT seq
5298 nt
NT seq
+upstream
nt +downstream
nt
atggcagactttatggatcaagaggcagtggaagactctgaggaggagatgtcggcagag
gagtcttcttcccgtcggcccaaagggaagaagaagaagaagcatagccggcagttgagt
tcggatgaggaggaggaagaggaggatgaggacgaggagaaggcccgtgaggacatgaag
ggcttcattgacgacgatgacgatggtgtggaagaggagaaggagtctgagagtgggtcg
gacactggggagtcctcctcgcggcgacgtaagaagaagcgtcggaaacggcgctccgag
gacgaagaggacattgatgaagaagatatggagctgcttcaagagaatttgggtataaaa
atacaaaagaagcgcaaacgtatccgaatgggatctggatctgaagaggactctgatgga
gagtcccgcattgcttctcagcgcagtagtggggactctgagggagaggctcatgacaag
agaagtagcagtggaaagaacaaatccattcgagcctcttccgtggccacaagttccaag
gctggctttattgactctgaggaagaggcggaaaaggccatggaagaggatgaagacgat
ggatttatcgtggatgaggacggtgttcctattcagaaacggagaaaaaagaagaagact
catatatttgaagatagtgcaagacaacttgccgaggatatttttggagtggccttcgac
tatgaagagtttgaggatgatagagttgaagaagaatccgacgacgaggaggaagatgac
tacgatgacgaggaagcagcagaggctcgaagactcaagaaacttaaaaagcaaaaaaga
aagtcggctaaaaccatttttgagatatttgaaccacgagaattggagcttcgtcacttc
acagatcttgataatgaagtgaggaatacggatattccagagagaatgcaactacgctcc
attcctgtgacttcagttcctgagggttcagatgaactggatagggaagcagaatggatc
ttcaaatatggattcatcaaaccaacaatatcgaaacaagatggctatagtagagacgat
tgtcaagaatgggttcgaaaagatcggacagttgaaaaaattaaaaaggcacttgacttt
atgagacagcaatttcatgaagttccctttattgcattttatcgcaaggaatatgttgaa
ccggagctaaagataaatgatctttggagagtatattttatggatgaaaattggtgtcaa
ttacaaagtcgaaagaaaaatttaaggaaattattcaagagcatgcaaaattggcaagga
gaacagttggtggctgatatggataaacccattcctgaaggaatgcgcatactatcaaat
gaggatcttcaaaatattgataatattgaaagttatgaagagcttaaagacatggatctt
tttttcaaactctactattccaaggatctcgaagccatgcaaatagcaataaaacaaaag
aggcgtgaagctagagaagctaaacgttcaaatcgcaagaaaaaaacaaaaattataacg
aatgaagacggtgaagaaattcaagtcacagatgaagaaagtccggttctagactctgaa
gattcgggtacagatgaccaagatttgctcagacaagcgagtaaaaatgatccatactca
atttgtagaaaatatggactgattggtatgtctaaaaggtttggacttacgcctgaacag
tttgcagaaaacttacgagatggatatcaaaggcatgatttagatcaggagccttctgaa
cctcttgaagtagctgcagaatatgtcaatcaaaaattcaaggaccctaatgatgtcctt
aaagccgtcaagtttgttgttgcaacgcaattaagcagagagccggaggttagacgtgtt
actcgagagattttcaatgagagagccacgatatgtgttgctcctacaaaaaaaggattg
acggaaattgatgagagtcactactgctactctatgaagtatctcaagaacaagttagtt
cgaaatttgagtggtacacaatggttaaatttgactgctgcagaggatcaaaagctgata
acaataaccattgcaacggaaataccttctttatctggaaacaaacaaagaaatcacttg
gaagaagccaaagagctatataagcatgatggtttttctaaacatgtgaccgagtggaat
aatctaagggcggaatgtattgaaacaacgttcaaggaaataatttatcctgttcttcga
caagagcttcgtatacgactcactcgtgaggccaaggacggtgttttacggcaatgcaaa
aacaaaatgtacgattatttaaaaaccgccaagtatacagtttcatttgaagaggaagat
gaggatgactgggattcatcaggagggtgtcgtgttatgtccatttcctacgagaatgat
actgacgttgcttcttatgccgtgtgcattggagtgaatggtgaagtaatcgatttttta
aaaatggaggccttgcttatgaggagtaacatttctcaagactctaagaggaacagacca
tctggtgatcgtcgaaataaggatgtcgatatggctaaattaaaaagttttattattcaa
aagagacctcatgttattgttgttggggcaattgatagagatgctgtgcgagtaaggtat
gatgtggaagcagtggttcacgagctagttgaaggagagcatcagttcccaaagattggc
gtatttctcatggatgacaaccttgctaaagtatattcaaattctactcgagcatcccaa
gatttcagagactatcccaatgtattaaggcaaggtattagcctcgctcgtcgtatgcag
gatcctttgatagagttcagccaattggcaggaccagaaaatgaaatactctgtttaaat
ttccatcctcttcaaaatagacttgaagaagaagaacttttagaggcaatcaatattgaa
tttataaatcggactaatgaagttggtgttgacatcaatgagtgtgtgagtcgaccacag
acctcgaatcttgttcagtttgttggtgggctaggtccacgaaaaggtgctgctcttctc
aaaactttaagacaaatgcagtcatctcaaagactggaaaatcgacaacaactcgttacc
ctttgtcatatgggtcctaaagtgcttattaattgtgcgggtttcataaaaattgataca
acctccttgggagactcggaggtgtacttggaagtgcttgatggatcccgtattcacaat
gaagcatatgaatgggcaagaaagatggctgtggatgcccttgaatacgacgaggaagag
gggaaccccgcaactgcgttggaggaaattataaacgaccctgaaaaattagctgaattg
gatttggatgcatttgctcgggagttggaaagacagggttttggaaataaatctattacc
ctttatgatattcgtgcagaactttaccacatgtataaggacttacgtgagccataccgg
cctccagatccggaagaaatttttaatatcgtaactaaagagaatcccgagactttttac
attggcaaattgataaatgctaccgtgtcaggattcacttataaaaaacctcaaggggaa
gagcttgatcaagctgctcctataagagcgggagaagaaaacgtttggcagtgtccattt
tgtggtcgtgatgactttcccgagttgacagaagtgtggaatcactttgatgctggaatg
tgtccaggaaaagctactggcgtcaaaatacggatcgataatggtgtatctggatttatt
ccaatcaaaaacttgtcagacaagcaagtaattaatccagaagatcgagtcaaaatagga
caaaccatcttttgtcgtatcgtaaaaattaatcccgagcgtttttctgtggaatgtata
tccaaaacatctgctttagtggataaagagcatgagtggaagcccgccaaggatgatttc
tacgatgaagaagctcaagctcgtgatatggaacagagtactatgaagaaaaaacaacaa
gaaaggcaaacttatattaaacgagtaattgttcatcctagcttttataatgttggctat
aaggaagctgaaaggcttattgccggaatggatcagagtgatgttgtaattaggcctagt
tctaagggggaagatcatctcaccgttacctggaaagtgactgatggaatatatgaacac
attgatgttcgggaagaaggaaaacttaatgcattctccttgggacagtctctttggatt
ggcaatgaagaatttgaagatttagatgaaataattgcacgtcacatcaatccaatggcg
gcacatgccagagacatattaaacttcaagtattacagggatacagagggtggaaagcga
gaagtagcagatgaaatgctcaaggcagacaaagctgcaagtcctggtaagatccactat
ttcttatctgtcagtaaggcctatgcgggtaaattcatgctgagttaccttccacgaaca
aaaactcttcatgagtttgtgactgttactcctgatgggttcagatttcggaagcaggtt
tttgaaacgctttcatccctcatgaagtggtttaaggaacattttcgagatcctcttcca
ggtacaccaaatactcctggtcgcttaacatctcgaactccttatatgaccgggggtact
ccagggccaggaactataacgcctggtgccatgagtctcgctacaggaactccatatggt
acaactcctggagccatgtccaattatggagtaagtgtgaatactccatatactccatct
ggacaaactccattcatgacgccttatcacactccaggcccctcaacaacacctcggcca
tctcgtggaacacctggaccaactccaaataggtcatttcctacagtacctactccaaga
agtagtagcgggggtggtggtaatgttccttcttctggtggtcgcccaagtggaggacag
tcctcacatcaacaaggtcgtgtaagatcctcttatagtaaaagtccagcgcatggtcat
cgcggaggagatagttggcaagctgcacttgatgcatggcctggtggatcttcaaggcgt
actcctcgacaaggcgacggatcaaacacgcccagaggatttgatggtcgccaaaagact
ccaaagtacgggggaaataacactcctaagagaactcctaaggcctttggagatgctaca
cccttatacgacgagtag
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