Lepeophtheirus salmonis (salmon louse): 121126304
Help
Entry
121126304 CDS
T08214
Symbol
Dhx15
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121126304 (Dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsm03041
]
121126304 (Dhx15)
03009 Ribosome biogenesis [BR:
lsm03009
]
121126304 (Dhx15)
Enzymes [BR:
lsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
121126304 (Dhx15)
Spliceosome [BR:
lsm03041
]
Complex A
U2 snRNP components
U2 related factors
121126304 (Dhx15)
Complex B
121126304 (Dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
121126304 (Dhx15)
Ribosome biogenesis [BR:
lsm03009
]
Eukaryotic type
90S particles
Helicases
121126304 (Dhx15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
Flavi_DEAD
SRP54
ResIII
Cas3-like_C_2
AAA_7
nSTAND_NTPase5
T2SSE
AAA_25
TsaE
NAT10_TcmA_helicase
HTH_IclR
AAA_30
Motif
Other DBs
NCBI-GeneID:
121126304
NCBI-ProteinID:
XP_040577574
LinkDB
All DBs
Position
11:complement(16267824..16270437)
Genome browser
AA seq
709 aa
AA seq
DB search
MPKHRLDLDGASSSKRLKDESPSSTKPGLKMNPYSALPYTPRYFELFRKRITLPVWEYRD
KFLDLLAQHQCICLVGETGSGKTTQIPQWCAEYASKERKSVACTQPRRVAAMSVAQRVSE
EMDVSLGQEVGYSIRFEDCSGPRTILKYMTDGMLLREAMSDPMLDAYKVILLDEAHERTL
ATDILMGVLKTVTTHRNDLKLVIMSATLDAGKFQNYFDNAPLMNVPGRTHPVEIFYTPEP
ERDYLEAAIRTVIQIHMCEEQEGDCLLFLTGQEEIEEACKRIKREVDNLGNEIGDLKCIP
LYSTLPPNLQQRIFEPAPGRKSNGAVGRKIVVSTNIAETSLTIDGVVFVIDPGFSKQKVY
NPRIRVESLLVSPISKASAQQRAGRAGRTKPGKCFRLYTEKAFKNEMQENTYPEILRSNL
GSVVIQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALDDDGNLTELGAIMAEFPL
DPQLAKMLIASCENNCSNEILSITAMLSVPQCFVRPNDAKKAADDSKLRFAHIDGDHLTL
LNVYHAFKQNMDDPQWCYDNFVNYRSLKSADNVRQQLCRIMDRFNLKRTSTDFASKDYYV
NIRKALCAGFFMQVAHLERSGHYLTVKDNQIVQLHPSTCLDHKPEWVLYNEFVLTTKNYI
RTVTDVKPDWLIKAAPQYYDMNNFPQCEAKRQLEQVIQRINSRQYQKGF
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagcatcgtttggacttggacggagcttcttcttcgaaacgcctcaaagacgaa
tctccttcctccacaaaacctggtttaaaaatgaatccctattccgccctcccctacact
ccccgctattttgaactctttcggaagaggattactctccctgtttgggagtaccgtgat
aaatttctggatctcctggctcagcatcagtgtatttgtttggtgggagagacaggatct
gggaaaacaactcaaatccctcaatggtgtgcagagtatgcaagtaaagaacggaaaagt
gtggcgtgcacacaacccagaagggttgccgccatgagtgtggctcagcgtgtatctgag
gaaatggatgtctcattagggcaagaagtgggttactccattcgttttgaggattgttcc
ggtccgcgtactattctcaagtacatgactgatggtatgttacttcgagaagcaatgagt
gatcccatgttggatgcatataaagttattttactcgatgaagctcacgagaggactcta
gctactgatattctgatgggtgttttgaagacagtgactactcatagaaatgacttaaag
ttggtcatcatgagtgctactctggatgctggcaagtttcaaaactattttgacaatgca
cctttgatgaatgttccgggtcgtacacatcctgttgaaatattttatactccggagccc
gagagagactaccttgaggctgctatccggacagtgattcagatccacatgtgtgaagag
caggaaggagactgtcttctctttctcacaggccaagaagaaattgaagaagcttgtaaa
agaattaaaagagaagttgataatttaggaaatgaaataggagatcttaagtgtattcct
ctctactccactctacctccaaatcttcagcaaagaatatttgaacccgcgcctggaagg
aaatccaatggagctgttggacgaaagatcgttgtttccacaaatattgcagaaacctct
cttaccattgatggagtggtttttgtgattgatcctggattttctaaacaaaaagtatat
aatcctcgtatccgtgttgagtctcttcttgtatcccctatcagtaaagcttcggctcag
cagcgtgcaggaagagcagggcgtacaaaacccgggaaatgttttcgactttacaccgaa
aaagcattcaaaaatgaaatgcaggaaaatacataccccgagattttgagatctaacttg
ggctctgttgtaattcaattaaaaaaactgggcattgatgatcttgtccatttcgatttt
atggatccacccgctcctgaaaccttgatgcgagctctggaactccttaattatcttgca
gctctagatgatgacgggaatttgactgaactgggggcaatcatggctgagtttccactt
gatcctcaattagccaaaatgttgatagcttcatgtgagaacaattgttcaaatgagatc
ctttccattacagccatgttgtctgttcctcagtgctttgttcgtcccaatgacgccaag
aaagctgccgatgattctaaactcagattcgcacatattgacggcgatcatttaacattg
cttaacgtgtaccatgcatttaagcaaaatatggatgacccacaatggtgttatgataat
tttgtaaattaccgctctctcaagtctgcagataatgtccggcaacaattgtgtcgcatt
atggatagatttaatttgaagagaacttcaacagactttgcatctaaagattattacgtt
aacattcgtaaagcactttgtgctggtttttttatgcaagtagcacatcttgagagatcc
gggcattatttaaccgtaaaggataaccaaattgtacaactgcatccctcaacttgcttg
gatcacaaacctgaatgggttctctataacgaatttgttcttactaccaaaaactatata
cgaactgtaacagatgtcaaaccagattggttaattaaggctgcaccccaatactatgat
atgaataacttccctcaatgtgaagccaaaagacaattagagcaagttattcaaagaatt
aactcaagacagtatcaaaaaggattttaa
DBGET
integrated database retrieval system
