Lepeophtheirus salmonis (salmon louse): 121126635
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Entry
121126635 CDS
T08214
Name
(RefSeq) glutamate receptor ionotropic, kainate 2 isoform X1
KO
K05313
glutamate receptor, ionotropic, invertebrate
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsm04040
]
121126635
Ion channels [BR:
lsm04040
]
Ligand-gated channels
Glutamate (ionotropic)
121126635
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
121126635
NCBI-ProteinID:
XP_040577873
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Position
12:7237442..7291003
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AA seq
928 aa
AA seq
DB search
MLLCLIVISALSSAKGWSSDIRIGAIFTDDQKDSPSELAFKYAIYSLNKKDDIMLNKTIT
YDIQYVQKEDSFRTTQKVCELLDNGIVSLFGPTDLLLGSHIQNLCDALDIPHLEASRMDI
EDSFKEFSINLHPSQDVMNKAYKDLMVFLNWTNAAILYEDDFGLVRLQDLVRSSTQSRKL
DLYIRQTNPTNYRNVLKEIKKKRIFNIVIDTDSKNIQYLFRVILQLQMNNQKYHYTFTSF
DVETFDLEDFKYNHVNLTSFRLVDPESIRAKKVFDEMVALSPIRRSILNSTNIILTEPAL
IYDSVMAFAKGLENVSALGSLISMPKISCNDELPWEGGSILFNYISSVKFYGLTGPIRFL
EAKRSGLKMDLLKLKAGKMTKVGEWKQEIGLNITDMYAFVQGRPPNITLKVLSRIERPFV
MFKKTKEGWNNKWQGNDRFEGFCVDLLQQISEQVGFNYVIELVDDNNYGALNLSTGIWNG
LVKELIEGNADMAMGAMTINFARETVIDFTKPFMNLGISILFKIPSGKPTRLFSFMNPLA
LEIWLYVLAAYILVSLTLFVMARFSPYEWNNPHPCETENDIMENQFSISNSFWFITGTFL
RQGSGLNPKAASTRIVGGIWWFFTLIIISSYTANLAAFLTVERMITPIENAEDLARQKEI
EYGTLSGGSTMTFFRDSKIEVYREMWKFMESRNPSVFVDNYDTGINSVKNGGYAFLMEST
MLDYVVQRDCNLTQVGGLLDSKGYGIGTPKGSLWRDHLSLAILELQEKGTIQMLYNKWWK
NTGDVCTRQDKSKDSKAHPLSVKNIGGVFVVLLCGLTIAIIVAILEFCWNSRKNALSDRQ
SLCSEMTEELRFAIRCYGSRQKPALRRSCSQCSPDDTYVPVIEDFSNTSQSENKISNSAI
LYGLESFSLNDQCHHFQYHINKKHLTTK
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgttattatgtttaatagttattagtgcgttatcaagtgcaaaaggatggtcatctgat
atacgaattggtgcaatatttacagatgatcaaaaggattcaccatctgagttagctttt
aaatatgctatttactcattaaataaaaaggatgatataatgttgaataagaccatcaca
tatgatattcaatacgttcaaaaggaagattcatttagaactacacagaaggtatgtgaa
ctgttagataatggtatagtaagcttatttggaccaacagatttattacttggatcccat
atacaaaatctttgtgatgcactggatataccacatttagaagcaagtaggatggacata
gaagattcctttaaagagttcagtataaatcttcatccatcgcaagatgttatgaataaa
gcatataaagatttaatggtattcttaaattggaccaatgccgccatattatatgaagat
gactttggtttagtacgccttcaagatttagttcgttcaagtacacaatctcgaaaacta
gatttatatattcgtcaaactaatccaactaattatagaaatgttttaaaagaaattaaa
aaaaaaagaattttcaatattgttatagatacagattcaaaaaatattcaatatcttttt
agagttatattacaattacaaatgaataaccaaaagtatcactatacattcacatccttt
gatgtagaaacatttgatttagaagattttaaatacaatcatgtaaatttaacaagtttt
cgacttgttgatccagagtcgataagagctaaaaaagtatttgatgaaatggtagctctg
agtccaataagacgatcaattctaaattcaactaatattatcttaacagaacctgcatta
atatatgattccgttatggcttttgccaaaggcttggaaaatgtatcagcacttggatca
cttatttcaatgccgaaaatatcttgtaatgacgaacttccttgggaaggtggatccatt
ctcttcaactatatatcttctgttaaattttacggactaaccggacctataagattttta
gaagcgaagagaagtggtctaaaaatggatctcctcaaattaaaagcaggaaaaatgacc
aaagtaggggaatggaaacaggaaatcggactaaacataactgatatgtatgcatttgtg
caaggaagacctccaaatattacacttaaagttctatctagaatagagcgcccgtttgtt
atgtttaaaaagacaaaagaaggatggaacaataaatggcaaggaaatgatagatttgag
ggattttgtgttgatctcttacaacaaatatcagaacaagttggttttaattacgttatt
gaacttgtggatgataataactatggtgctctaaatttatcaactggtatctggaatgga
ttagtgaaagagctgatagaaggaaatgcagatatggctatgggagcaatgacaataaat
ttcgcaagagaaactgttattgattttacaaaaccattcatgaatctaggaatttcaatt
ttattcaaaataccaagtggcaaaccaacaagattattttcgtttatgaatcctctggca
ttagaaatttggctatatgttttggctgcatatatacttgttagtcttactttatttgta
atggctcgattttctccatatgaatggaataatccacatccttgtgaaacagaaaatgac
attatggagaaccagttttccatttctaattctttttggtttattactggaactttttta
agacaaggatctgggttgaacccaaaagctgcatcaactcgtatagtaggaggaatatgg
tggttttttactctaattataatatcatcttacactgccaatttagcagctttcctaact
gttgaaagaatgataacacctattgaaaatgccgaagatctagctagacaaaaagagata
gaatacggaacattgagtggtggatcaaccatgacatttttcagagattcaaaaattgaa
gtctatagagagatgtggaagtttatggaaagtcgaaatcctagtgtatttgtagataat
tatgatactggaatcaatagcgtcaaaaatggtggatatgctttcctaatggaaagtaca
atgctagattatgttgtacagagagactgcaatctcactcaagttggaggtctccttgac
tcaaaaggttatggcattggcactccaaaaggatccctttggagagatcatttatcatta
gctattctggagcttcaagaaaagggaactatacaaatgttgtataacaaatggtggaaa
aatacaggagatgtatgtacaagacaagacaaaagcaaggattctaaagctcatccacta
agtgtaaagaatattggtggagtttttgttgttcttctttgcggtcttactatcgctatt
attgttgcaatattggaattttgttggaactctcgtaaaaatgcattaagtgataggcaa
agcctttgctccgaaatgacagaagaacttcgctttgcaattagatgctatggatctcga
cagaaaccagccttgagaagaagttgttctcaatgctctcctgatgacacttacgtccct
gttattgaagatttttctaatacatctcaaagtgaaaacaagatttcaaactcagcaata
ttatatggccttgaaagtttttctcttaatgatcaatgccatcattttcaatatcatatt
aataagaaacatttaacaaccaaataa
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