KEGG   Lepeophtheirus salmonis (salmon louse): 121126688
Entry
121126688         CDS       T08214                                 
Name
(RefSeq) negative elongation factor D
  KO
K15181  negative elongation factor C/D
Organism
lsm  Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:lsm00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    121126688
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lsm03021]
    121126688
Transcription machinery [BR:lsm03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     121126688
SSDB
Motif
Pfam: TH1
Other DBs
NCBI-GeneID: 121126688
NCBI-ProteinID: XP_040577923
LinkDB
Position
12:10043654..10045788
AA seq 569 aa
MENEDYFRKDKCSGNEEDVNILSDCLIRFGSSDFIMEPEIFSQLKKYFQSGGNPEQVIEL
LSRNYVAVAQMANLMAEWLILAGAEISEVQQRVENHLHDTILKTFDPKKADAIFAEEGEE
TPSWLAELIEYPTWRSLIYRLAEDYPDCLMLNFTIKLISDAGFQGEITSISTAAQQIEVF
SRILKTSVITFLLSSADDVQRRRNMEECAKMVCHGQHTYVYAQVLLSVLAHEPKGGHVIQ
RLQEEIQTQAQKANHDVTPITLSLLSGFQHSRAGQALGSMLSKQTLNPADIVVLYKLYNQ
LDPPPVSLIRIPQFLQLLIDALFRPGSRINQEHKSKYIYLLAYASSVTDNWSHRRGTRKG
LNKDELKGTMQAAERVHNIVSSSKGATELISEIGTLYQCIRFPVASVGVIRWVECVVSES
NFFSRSTDYCPVHLALLDEVVTCHPLLHYKVLQLFIILFEAHYDSLEILAQLEIKKMLLD
RLVNLLSRGYVLPVVKYISRCWSNTGTDISLIRYFVTEVLDTIAPPYSAEFVKHFFPLVD
NDDITGSMRREGEDLVSEFIIFCRSHFEV
NT seq 1710 nt   +upstreamnt  +downstreamnt
atggaaaatgaggattattttcgaaaggataagtgttcggggaatgaggaagatgtgaat
atattatcggactgccttatccgatttggtagttctgactttattatggagccggaaata
ttttctcagctaaagaaatactttcagtccggtgggaatcccgagcaagtgattgaactg
ttgtcccggaactatgtggctgtggcacaaatggcaaatctgatggctgagtggttaatc
ctagctggtgcagagatctctgaggtacaacaaagggttgagaatcatctccatgatact
atactcaagacatttgatcctaaaaaagcggatgccatcttcgctgaagaaggagaagag
actccctcttggttggccgagctcatcgaataccccacttggcgttcccttatttatcgc
ctcgctgaagactaccctgattgcttaatgctcaactttaccattaagctaatatcagac
gcaggatttcaaggtgaaatcacgtctatttcgacggcagcccagcagattgaagtattt
agtcgaatactcaaaacatcggtcatcacatttttgctcagctcagctgacgacgtacaa
aggcgtagaaatatggaagaatgtgcaaaaatggtatgtcatggccaacacacatatgtt
tatgcacaagtgctcttatctgtccttgcacatgaaccaaagggtggtcatgtcatccag
cgtctacaggaggaaatacagactcaagctcaaaaagcaaatcatgacgtgacacccatt
accttatctcttctctctggcttccaacactcgagagcgggacaggctttaggatccatg
cttagcaaacaaacccttaaccctgcagatattgttgtcttatacaagctatataatcag
cttgatcctccccctgtctcattgattcgtattcctcagtttttacaattattaatagat
gcactttttagaccaggatctagaatcaatcaagaacacaagtcaaagtatatatatcta
ttggcgtacgcatcatctgttacggataattggagccatcgacgagggaccaggaaaggt
ttaaataaggatgaattgaaagggaccatgcaggctgctgagagagtgcataacattgta
tctagctcaaaaggagcaacggaactgatttcagaaatagggactctttatcaatgcata
aggttcccggtagcttctgtgggagtgatacggtgggtggagtgtgttgttagtgaatcc
aatttcttctcccgttctactgactattgtcctgtacatttagctctgctcgacgaagtt
gtcacatgtcatcctcttcttcattacaaagtcttacagttatttattattctgtttgag
gctcactacgattcacttgagatacttgctcaacttgaaattaagaaaatgctcctcgac
aggttagtcaatctgttatctaggggatatgttcttcccgtggttaagtatatttctcga
tgttggtctaacacaggcacagacatttcacttattagatacttcgttacagaagtatta
gatacaatagctccaccttacagtgcagaatttgttaaacattttttccctctggttgac
aatgatgacattactggatctatgagacgcgaaggtgaagacttagtttctgagttcatt
atcttctgccgtagtcatttcgaagtttaa

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