Lepeophtheirus salmonis (salmon louse): 121126699
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Entry
121126699 CDS
T08214
Symbol
beta'COP
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121126699 (beta'COP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsm04147
]
121126699 (beta'COP)
Membrane trafficking [BR:
lsm04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
121126699 (beta'COP)
Exosome [BR:
lsm04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121126699 (beta'COP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_RIG_2nd
ANAPC4_WD40
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_LRRK2
Beta-prop_IFT122_1st
Beta-prop_ELP1_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
121126699
NCBI-ProteinID:
XP_040577934
UniProt:
W0NWG0
LinkDB
All DBs
Position
12:83315..96239
Genome browser
AA seq
894 aa
AA seq
DB search
MPLRLEMKRRLTARSDRVKSTDLHPVEPWMLASLYNGNVHIWNYESQQLVKSLEVCDLPV
RAAKFVSRKNWVVTGSDDMKLNVFNYNTLERVSCLEAHSDYLRSLAVHPSEPLVLSSSDD
MLIKLWNWDKAWACEQVFEGHTHYIMQVVINPKDNNTFASASLDRTIKVWHLGASCPNFT
LEGHDKGVNCLDYYHAGDKPYLISGADDRSVKIWDYQNKNCVQTLEGHAQNIASVCFHPE
LPIILTGSEDGTVRIWHASTYRLENTLNYGLERVWSISSLKGSNNVSIGYDEGSILVKLG
REEPAMSMDSSGKIVWAKHSELQQGNLKTLGDVDLKDGETLPISVKDMGSCEIYPQTITH
NSNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAAESSEYAIRENSSTLKVFKNFKE
KQSLKPEFGIESIYGGCMLGVKSPSGLAFYDWETLELIRRIETQPRSVCWSDNGELVALI
TDECYFILRYQKEIVAYARETKQNVSDDGIEEAFEVLSENPECVRTGVWIGDCFIYTNSL
NRLNYYVGGEIVTISHLDRTMYILGYIPSDNKLYLGDKELHVVSFQLLLSVLEYQTAVMR
RDFDTADKVLPVIPRDQRIRVAHFLEKQGFKKQALVVTSDLEHKFELAICLGDLKTAQSL
VIENPGEQKWKQLAELAIANADFDLAQSCLKEAKDFGGLLLLATSLGNNLVINYLSNSAA
QLGRKNISFISSFLMGNLENCLDILISTNRLPEAAFFSRTYLPTLIPKVLSLWKEKLNQK
SVKASQSLADPINYSNLFENYNDAIGVEKFLQKKRMELLVATEYIGSNDDLGLIHSVENK
EGCNSLDTLVTNENNIERKFSDKHNDIEAELEGMRLDCTESNFDSINDNELFDD
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgcgactggagatgaagagacgtttgacggcgcggtctgatcgtgtcaagtcc
acagacctgcacccagtggagccttggatgttggcctcgctttacaacgggaacgtgcac
atttggaactacgagtctcagcagttggtcaagtccctggaggtgtgcgacttgccggtg
cgagccgccaagtttgtgagccgtaagaattgggtggtgacgggttctgacgacatgaag
ctgaatgtgttcaactacaacaccctggagcgtgtgtcttgcctggaggcgcactctgac
tatctgcggtccctggccgtccacccgagtgagcccctggtcctctcctcctcggacgac
atgctcattaagctctggaactgggacaaggcctgggcctgtgaacaggtcttcgaggga
cacacgcactacataatgcaagtggtcatcaaccccaaggacaacaacacttttgcctcc
gcctctttggaccgcaccatcaaggtctggcacttgggcgcatcgtgccccaacttcact
ctggagggacatgacaagggcgtcaactgtctggactactaccacgccggggacaagccc
tacctcatctcgggggcagacgatcgctccgtcaagatttgggattatcagaataagaat
tgcgtgcaaaccctggaaggacacgcccaaaacatagcgtctgtgtgtttccatccagag
ctccccataatcttgactgggtctgaggatggaacggtacggatctggcatgcaagtaca
tatcgcctcgaaaatactcttaattatggccttgagcgcgtttggagtataagttctttg
aaaggttccaacaatgtatccattggctatgatgaaggttctattcttgtcaaacttggt
cgagaagaaccagcgatgtccatggattcctctggcaagattgtttgggcaaaacattct
gaactacaacaaggtaatttgaagactcttggtgatgttgaccttaaagatggagaaacg
ttgcctatttctgtcaaggatatgggttcatgtgaaatatacccacaaacaataacacat
aattctaatggacggtttgttgttgtgtgtggagatggagaatacataatttacactgct
atggcacttcggaataagtcatttggttctgcccaagaatttgtatgggcagctgaatct
tcggaatatgctattcgtgaaaactcatcaactcttaaagtttttaagaattttaaggag
aaacaatcactaaaaccagaattcggcatcgaaagtatttatggtggatgtatgctgggc
gtaaaatctccctctggattggctttttacgattgggaaacattagagcttattagaaga
attgaaactcaaccacggagtgtgtgttggtctgacaatggagaactagtagctctaatt
acagatgagtgttatttcattctcagataccaaaaggaaattgttgcttatgcacgtgaa
acgaagcaaaatgtatcggatgatggaatagaagaagcgtttgaagttcttagtgaaaat
cccgaatgtgttagaactggtgtttggattggagattgttttatttatacgaatagtttg
aatcggttaaattattatgtcggtggagaaatagttaccatatctcatttagacaggact
atgtacatccttggatatattccttcggataacaaactttatcttggtgataaagaacta
catgtagtatcatttcaacttctattgtcagttcttgagtatcaaactgctgtgatgcga
cgtgattttgatactgcagataaagttctacctgttattccgagggaccagcgtatacga
gtggcacactttttagaaaaacagggctttaaaaagcaagcccttgtcgtcacttcagac
ttagagcataaatttgagctagcaatctgtttaggagatttaaaaacagcacaaagcctg
gttattgaaaatcctggtgagcaaaaatggaagcaactagcagaattagctatagctaat
gctgactttgatcttgctcaaagttgcttgaaggaagctaaagattttggaggcttactt
ctcctagccacttctttggggaacaacttggttattaactacttaagcaactctgctgct
caactagggaggaaaaacatatcttttatttcctcattccttatgggtaatttggaaaac
tgtttggacatccttatttctaccaatcgtttacctgaggctgcatttttttctcgcact
tacttgccaacattaattcctaaagtattgtcgttatggaaagaaaaactaaatcaaaaa
tcagttaaagcaagtcagagtttggcagatccaattaattactcaaatctatttgaaaat
tataatgacgcaattggagttgaaaaatttttacaaaaaaagagaatggagttgttagtg
gctacagaatatattggttcaaatgatgatcttgggcttattcactcagttgaaaacaaa
gaaggttgtaattctttggatacattagtcactaatgagaataatatagagagaaaattt
tctgataaacacaatgatattgaagctgaattggaaggaatgagattggattgtaccgag
tcaaactttgatagtattaatgataatgaattatttgatgattaa
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integrated database retrieval system
