Lepeophtheirus salmonis (salmon louse): 121126804
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Entry
121126804 CDS
T08214
Symbol
Hr3
Name
(RefSeq) probable nuclear hormone receptor HR3 isoform X4
KO
K14033
nuclear receptor subfamily 1 group F member 4
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsm03000
]
121126804 (Hr3)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lsm03310
]
121126804 (Hr3)
Transcription factors [BR:
lsm03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121126804 (Hr3)
Nuclear receptors [BR:
lsm03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
121126804 (Hr3)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121126804
NCBI-ProteinID:
XP_040578081
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Position
1:37221532..37327287
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AA seq
841 aa
AA seq
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MQNQKYYTNLSSMDWISGYRLPSNSDLKCDDDHHGGGAGVQHASVVGGPTGGALGSGSSG
PLTNNTNSNSSSPSMLGMWAAAVANTPLKVETADHHGNGSLVGNSVVVGTLPSKSSSSSS
TGMSAPGSIKAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNC
IVDRVNRNRCQFCRLQKCLALGMSRDAVKFGRMSKKQREKVEDEVRYHKEMNNQQSGGGG
ALTPSGRSSHNGNSPDSSCFDTQQQPSSTDMSYEGGGATSGFSYGSDLSPYNGGYTFTNI
PPPPHPPPPPPQQQHPQPGSEWTDYGNVDSTTSPFDSRSTPLDIPNPNNTNSSNSNNNNN
NNNSSNSGGIHRAPGPPESRIPSTSTASTSSSSSSSSSSSTSTSTTTTSSSGSASRHNNN
NTSTAAIPKAESPSTLVAVPGMKHPSQTSYGSSNRIGMTIKQEVTDMISGQTHLEGREEE
DPLSMGYDVDSTSNFATHQPSKSHHHLQPPPHPPSLHPSHHQPNHPSHHHPHPAVQQQQP
PVHTQHHQPQAQQHPGHHHHPSGSFSSGMHNNHELYLLQEELQNDPDRIGVLLTNSIFEA
HTRTSLLTRSQIHEQCKQGVDQVKLYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPG
FMKFPQDDQITLLKGGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLV
NQIFDLAKGFAELQLSEVTLALYSAYILLQEDRTGLKSVEEIRKLNQAVFQTLQRELTNR
PPMVPTKGDVSVLTKLLNKRHTLREINFLHTEALTRFRSGNGSMIEFPALYRELFSSDHP
S
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcagaaatattatacgaatttgtcctcgatggattggatatcaggctatcgt
cttccatccaattcggatttaaagtgtgatgatgatcaccatggcggcggggcaggagta
cagcatgcatctgttgtcggtggaccaacaggcggagcactaggctctggctcttccggt
cccctcacaaacaacaccaattccaactcttcctcaccctccatgctaggcatgtgggca
gcagctgtggccaatacacctctcaaagtggaaacagctgatcatcatggaaatggatct
ctggtggggaatagtgttgttgtgggtacactaccaagcaagtcttcatcttcctcctcc
accgggatgtcagctccaggatcaattaaagcccaaattgaaattataccctgcaaggta
tgtggagacaagtcctcaggtgttcactacggcgtcattacttgtgaaggttgtaagggc
ttcttccgtcgttctcagagttccgtcgtcaattatcaatgtccacgtcagaaaaattgc
attgtggatcgagtgaatcggaatcgatgtcagttttgtcgtctacagaaatgtttggca
ctagggatgtcacgagatgcggtcaaattcggtcggatgtcaaagaaacaaagggagaag
gttgaggatgaagtccgctaccacaaggaaatgaataatcaacaaagtggaggcggtgga
gcactcactccttctggccgatcctctcataatggtaactctccagattcttcctgtttt
gatacacaacaacagccctcttcgacagacatgtcctatgaaggaggtggcgccacctct
ggattttcctacggatcggatctgtccccctataatggaggctatacttttacaaacatc
cctccacctccccatcctccacctcctccgccacaacaacaacatcctcaacctggtagt
gaatggacagactatgggaatgtggactcgaccacgagtcccttcgactcccgctccact
cccctagacataccaaatcctaataatacgaacagttctaatagtaataataataacaac
aacaataattcaagtaacagtggagggatccatcgagcaccggggccgccagagagccgg
ataccttcaaccagtactgcatcaacctcgtcatcctcatccagttcatcatcctcctcc
acttccacttctacgaccacgacttcatcatcggggagtgcgagtagacacaataataat
aatacaagcacggccgccatacccaaagcagagtctccttctaccctcgtcgcagtacca
ggcatgaaacatccatctcagacctcatatggtagtagtaatcgtattggtatgacgatc
aaacaagaggtaacggatatgatttccggacaaacgcatctcgaaggacgagaagaggag
gatccgctctctatggggtatgatgttgacagtacgagtaactttgccacacatcaaccg
tctaaaagtcatcatcatctccaacccccacctcatcctccttctcttcatccttcacat
catcagccaaatcatccatctcatcaccatcctcatccagcagtacaacagcaacagccg
ccagtacatacacaacaccaccagccacaggcgcaacagcatcctggacaccatcatcat
ccctcagggagttttagcagtggaatgcacaacaatcacgaactttatttattacaagag
gaactccagaatgatccagataggattggagtccttttgacaaattccatatttgaagcg
catacccgtacgagccttttaacacgcagtcagattcatgaacaatgtaagcagggtgtg
gatcaagttaaactatacacctttaaaaacatgtctcaggaagaactctggttatgtgca
gctcagaagctgacaaatgtcattcagcaaatcattgaatttgcgaaaatggttccagga
tttatgaaattccctcaggatgatcaaatcactcttcttaaaggaggagcatttgaatta
gcggtgataagaatgagtcgttactttgaccttagtcaaaacgctgttctctttttcgac
atcatgttaccaatggagtccttcatgacaacgggagatacgggagaaatgaatttagtc
aatcaaatctttgaccttgcaaaaggttttgcggaactccagctttcagaagtgacattg
gctctctattcagcatatatacttcttcaagaagatcgaacgggtttaaaaagcgtggaa
gaaattcgaaaattgaatcaagctgtatttcaaacccttcaacgcgaattaactaatcga
ccacctatggttcctacaaaaggggacgtctcagtattgacaaagttattaaataaaaga
catacgctaagggaaatcaactttcttcatacagaggccctaacacgattccgtagcgga
aatggtagcatgattgagtttccagcgttatatcgtgaattattttcgtccgatcacccg
tcttaa
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