Lepeophtheirus salmonis (salmon louse): 121126945
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Entry
121126945 CDS
T08214
Name
(RefSeq) integrin alpha-PS2 isoform X1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
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Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
121126945
NCBI-ProteinID:
XP_071748123
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Position
12:complement(10896417..10975356)
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AA seq
1132 aa
AA seq
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MMCFLYTMFIIPFFFVVGNVLCFNLDLQSKVVYQGNSRIMFGFSVVGHKDNNNSWIIVGA
PEDESFFQGEVGINRPGSVYKCQTVWPFDCDQIPFDTMGNNNISGTTIDDKSLQWFGASL
YSSGEDGIVVACAPRYVYFSLNRQRREPVGTCYTATDSFSKFSEYSPCRTVAWGFHQQGY
CQAGFSCAISDDRLFIGAIGAYYAQGQVFSQNLKNRLDYFASQEGPENQDDSYLGYSLAT
GDFTGTNSVDLAVGVPRGANFTGKVVLFTGRRLFNLHNLTGNQVGSYFGYSLATFDGNGD
GLDDLAIGAPFQSSKLLGGLSEKYETGRVYVVYQNAAHKFRHWDIIDGKEIGGRFGLSLT
NLGDINGDGFKDLAIGAPYSEYNRGSVFIHLGSSKGISKEPDQIIHGSNQGITIPKGFGF
AISGSNDLDGNGYPDLIVGAPDSNQVYLFRSRAVVRVNSVIFFESVGGKIKSESRNCSLS
SGLHVACIYIKSCLEYTGRGVEDELDFLVTWMLDYRKKNNYRMYFLNNEHSRSQKKIMKL
KRNMSVCSRSLIYLLPEVVDKLSPIDASMTCEIYQKFSKEYYGNNTLQPILDPRDIKKKV
TDRIFIQKDCGIDNICVPNLGIIFNKSTENYLVGSEERFELDITIFNHGEAAYETTFYLH
IPNKVYYKKMRMINIQNEKNISIIKHRTPKILCSPPSQKNNFYLKCDLGNPMTTLSKISF
KIVLKPVFDQRKISSLNFEMLVNSSNPESDNTLEDNIRNISVPVIIKTELKIRGRSDPEP
LEFNISAYDSYLRDFKENALINKEFVENFNENDVGPEVTHVYQVENKGPSDILGAEVFIL
WPSFRTYEDEPLLYLTTQPQIRGNVKCNYVDDVNPYGIKINEQRNMQISESFREKRSQLS
IRTNNSKNIVSSYISEMDLSRVNDIDSHLNCGQTKCTLIYCSIGPLHKREFALFRLRSRL
WSKTISELAKSNGQKDFEISSKLISRVTDLPYGMDPVYLGFESLRITTHVQTLVGNQESV
KIPAWILVLSIFAGLIFLAFLSLLLNKFGFFRRKRPYNNIIVEKNNSCVKVSEERQPLAL
DTTKESRFNSCHSFQPANISEKVFFYWITFPIRNLMINRLILINISYVNHDL
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgttttttatatactatgtttattattccttttttctttgttgttggaaatgtg
ttatgcttcaatctggatttgcaatccaaagttgtttatcaggggaattctagaataatg
ttcggtttttcagttgttggacacaaagacaacaataattcatggattattgttggagca
ccagaggacgaatctttttttcaaggtgaagttggaatcaatcgacccggttctgtgtac
aaatgtcaaactgtatggccttttgattgtgatcaaattccttttgatacaatgggtaac
aataatatatcaggaacaactattgatgacaaatccctacaatggtttggtgcgtccttg
tatagttcaggagaagacggaattgttgtggcatgcgctcctcgatatgtttatttttca
ttaaacagacaaagaagagaacctgttggaacttgttacactgcaacagattcattttca
aaattttcagaatattcaccatgtagaacagtggcatggggattccatcaacaaggctat
tgtcaagcaggattttcctgtgcaatttcagatgatcgacttttcattggtgctattggt
gcttactatgctcaaggacaagtattttcacaaaatttaaagaaccgattagactatttc
gcttctcaagaaggacctgaaaatcaagatgacagctatttgggatattctttagctacg
ggagattttactggaacaaattcagtagatctagcagttggtgtgcctcgaggggcaaac
tttaccggaaaagtagttctttttactggaagacgtctttttaatcttcataacctaact
ggaaatcaagttggctcctactttggttattcattagctacatttgatggtaatggagac
ggtttagacgatttggctattggtgctccttttcagtcatcgaaattacttggaggactc
tctgaaaaatatgagactggcagagtatatgttgtgtatcaaaacgctgctcataagttt
cgacattgggatataatagacggtaaagaaataggtggtcgtttcggtctttcacttaca
aatttgggagatattaatggagatgggttcaaagaccttgcgataggtgcaccatattca
gaatataatcgtggatcagtttttattcatcttggttcatcaaagggaatatcaaaagaa
cctgatcaaattattcatggttcaaatcagggaataaccattcctaaaggttttggattt
gcaatatcaggatcaaatgatttagatggaaatggatacccagatttaattgttggtgct
cccgattcaaaccaagtttacttatttcgatccagagctgtggtacgagtcaattctgta
atattttttgaatctgtaggtggaaaaatcaaatcggaaagtcgtaattgttctctaagt
tctggattacatgttgcctgtatttatattaaaagctgtttggaatatactggacgaggt
gttgaagatgaattagattttcttgtaacttggatgctcgattatagaaagaaaaataat
tatcgtatgtattttttaaataatgagcactcacgatctcaaaaaaaaataatgaaacta
aagcgaaatatgtctgtttgttcaagatcactcatatatttactgcctgaagttgtggat
aagttaagtccaattgatgcaagcatgacttgtgaaatttatcaaaagttttcaaaagaa
tattatggaaataatactcttcagcctatactagatcctagagatataaaaaagaaagtg
acagatagaatttttattcagaaagactgtggaattgataatatatgtgtgcccaatctt
ggaattatatttaacaaatcgacagaaaactatcttgtcggcagtgaagaacgttttgaa
ttagatattacaatttttaatcatggcgaggctgcgtacgaaacaacattctatcttcac
ataccaaataaagtatattataagaagatgagaatgataaatatacaaaatgaaaaaaat
atttcaataataaaacatcgaactcctaaaattctttgctctcctccatctcaaaagaat
aatttttatttaaagtgtgacttaggaaaccctatgacaacattatcaaagatatcattt
aaaattgttctgaaaccagtatttgatcaaagaaaaatttcctcattaaattttgaaatg
ttagtgaatagttcaaatccagagtcagataatactcttgaagacaatattagaaatata
tcagttcccgttattataaagactgaattaaaaataagagggagatctgatcctgaacca
ctggagttcaatatatctgcatatgatagttatttacgagattttaaagaaaatgctctg
attaataaagaatttgttgaaaacttcaatgaaaatgatgtaggtcctgaggtgactcat
gtttatcaagttgaaaacaagggtccttcagacattcttggagctgaagtttttattttg
tggccatcttttagaacttatgaggacgaaccacttctttatctaacaacgcaaccacaa
atcagaggaaatgtcaaatgtaattatgtagatgatgtaaatccttatggaatcaagatc
aacgaacaacgaaacatgcaaatttctgaatcattcagagaaaagagaagtcagcttagt
atacgcaccaataattcgaagaacattgtttcttcgtacattagtgaaatggatttaagc
cgcgtaaacgatatcgatagtcacttaaattgtgggcaaacaaaatgtacattaatatat
tgtagtattggccccttacataaaagagagtttgcattgtttcgtttgcgttcccgtctt
tggtccaaaacaatttcagagctggcaaaatctaatgggcaaaaagattttgaaatttca
tcgaagttaatttcccgtgtcactgatctcccttatggaatggatcctgtttatttagga
tttgaaagtcttcgaattacaactcacgtgcaaactctagttggaaatcaagaatctgtc
aaaattccagcttggattttagtcctttcaatatttgctggactaatatttctagcattt
ctgtcattgctacttaacaaatttggatttttccgtagaaaaagaccttataataatata
atagtggaaaaaaataattcttgtgtaaaagtttcagaagaaagacaacctttagcattg
gacacaaccaaagaaagtcgatttaatagttgtcatagctttcaaccagctaatatatct
gaaaaagtgtttttttattggataacctttccaataagaaatctaatgattaatcgttta
attctaataaatatttcctatgttaatcacgatctctaa
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