Lepeophtheirus salmonis (salmon louse): 121127020
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Entry
121127020 CDS
T08214
Name
(RefSeq) integrator complex subunit 6-A isoform X1
KO
K13143
integrator complex subunit 6
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsm03041
]
121127020
Spliceosome [BR:
lsm03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
121127020
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
INT_SG_DDX_CT_C
VWA_2
VWA
DUF2197
Motif
Other DBs
NCBI-GeneID:
121127020
NCBI-ProteinID:
XP_040578318
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Position
12:12410057..12430888
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AA seq
972 aa
AA seq
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MTIIVFLVDTSASMEQKAYVSGRCSLLDVAKGAVEFFVKMRQKSCESRGDRYMLLTFEDY
PRNIKAGWKENLQTFMSELKNLVASGMTTMGSALKQVFDILNMNRMQTGIDMYGQGRYPF
YLEPAVIIVISDGGKLTTQGTVQAELNLPMYSTVPGSELTREPFRWDQRLYALVLRMAGT
PPASQDGHVATDNSPIDAMCEVTGGRSYMVTSQRVLHQCIDSLVQKLQFGVVVHFEKIGQ
DPPILNEHLEEDDLIFRQDVVQMDDEDALNTKGLTFSKENNSNSRPHTPNPILSPSNISW
HNCRRLIYVPRSAQKGFTLGFWPLPESFLPDSNSPTLVKRSAHPNVKFTCSSQEPMIIDN
LPFDKYELEPSPLTLYILARKQPKISWQVFIQGSGKGGPQDKGHPFGYLKASTNLLTVNL
FVLPYNYPILLPLLDELFRQHRLKPTNEWKSQFNNYLKTMPSYYAGPLRKALTRMGAGNL
AISLIPDSLDNCLSYTVSTYLKRLKNQAKLEYDKTLSSTPVQRNRIENLKIVPRSPLKKE
LLLSSFPQDKVVHSRDQFTDFSGYALQCKDSKTCHYNRYRNPFDVPRHDLLDQIVRMKSN
FLQSTQNAKLVDDDSKHSLPIGQMGNYQDYLKRMPTPLKEIENTPVRQHMFGNPFKINKN
IMLDEVVDEIALAGGPSVNSGGIHQATNSVLQSRKRLIDFSNSPIPKKLKKGPLPRDFIY
RSRSYSLSLSTNHNVDYSNLYIENQSFLINDASVESVCSTNSTNNSLVIQSNHVSNTTPE
MIVELPEVSDPPQLSIPENTLMPSVVLINGICTENELSCNTIEGSKVRYEIKEENCDKSV
SILFESPITNFPEKFNTSYDGCEDQYSRYLSVTTLDPFSDVSGDCHTLFKLNNEELRSIK
LRNQNIRQIICKEVKRPGKNHDRLYKMLKEDLHGPSQIRRDYIKEVIQEAFRFKRKSLAE
YLLLKMDELVRI
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgacaataatagtgtttttagtggacacttcagcctcaatggagcagaaggcgtatgtg
tctggacgttgttccttgctggatgtagctaaaggagctgtagagttcttcgtgaagatg
cggcaaaaatcttgcgagtctcgtggggatcgctatatgctgcttacgtttgaagattac
cctaggaatatcaaagcaggttggaaagagaatcttcaaacatttatgagtgaattaaag
aatttggtggcctctggcatgacaacaatgggctccgctttgaagcaagttttcgacatt
ctcaacatgaaccgaatgcaaaccgggatagatatgtatggacaagggcgctaccctttt
tatttagagcctgccgtaattattgtcatctcggacggggggaaactcacaactcaaggc
actgttcaggcagagctgaatttgcctatgtattctactgtacctggatcagagctcact
cgtgagccttttcgttgggatcaaaggctttatgcgcttgttcttcgtatggctggtaca
ccgccagcttcccaggatggacacgttgccactgataacagtccaatagatgctatgtgt
gaagttacaggtggtcgttcctacatggtaacttcacagagagttcttcatcaatgcatt
gatagcttagttcaaaaactacagtttggagtggttgtccatttcgaaaaaattggtcaa
gatccgcctattctcaatgaacaccttgaggaagatgatctcatctttaggcaagacgtt
gtccaaatggatgatgaagatgcattgaatacgaaaggcttaactttttccaaagaaaat
aatagtaatagtaggcctcatacaccgaaccctattttatctccgtcgaatattagttgg
cataactgtaggaggctaatttacgttcctagatctgcgcaaaagggatttactcttggt
ttttggccgcttcccgagtcatttcttccagatagtaattctcctactcttgttaaacgt
tccgcgcaccctaatgttaaatttacttgtagtagccaggaacccatgataatcgacaat
ttacctttcgacaagtatgaacttgaacctagtccactaactttatacattctggccagg
aaacaacctaaaatatcttggcaagtattcattcagggttctggcaagggaggtcctcaa
gataaaggacatccttttggttatttgaaagcatctactaatttattgactgtaaattta
tttgttttaccttataactatccgatacttcttccactattagacgagctttttcgccaa
catagattaaaacctacgaatgagtggaaaagccagtttaataattacttgaaaacgatg
ccttcttactatgctggaccactgaggaaagcccttacgagaatgggagctggaaatctt
gccatatctctgataccagatagtttggataattgtttaagctatacagtatctacctat
cttaaaagacttaaaaatcaagctaagctggagtatgataaaacccttagttctactcct
gttcagagaaaccgaattgaaaatcttaaaattgtacctcgatcacctcttaagaaggaa
ttgttgttatctagttttcctcaagataaagtcgttcactctcgagatcaatttacagac
ttctctggttatgctttgcagtgcaaggatagtaaaacatgtcattacaaccgttataga
aatccgtttgatgttccgcgtcatgaccttctggatcaaatagtaagaatgaagtcaaat
tttttacaatcaacccaaaatgcaaagttagttgatgatgactctaaacattcattgcct
attggacaaatgggaaattatcaagactatcttaaacgtatgcctaccccacttaaagaa
atagaaaatactccagttcggcaacacatgttcggaaatccttttaaaataaacaaaaac
attatgttggacgaggtagttgatgaaattgctctagctggtgggccttctgttaattcc
ggaggaattcatcaagcaactaacagtgtcttacaaagtagaaaacgtttgattgatttt
agcaattcgcctattcctaaaaaattgaagaagggcccccttcctcgagattttatttac
cgaagtcgttcatattctctctctctctctacaaatcataacgtcgattattcaaattta
tatatagaaaatcaatcgtttttgattaatgatgcttcagtagaatcagtctgttctact
aactccaccaataattctttagttattcaatcaaatcatgtttcaaacactactccagag
atgattgtagaattgcccgaagtttctgatccacctcaactatcaataccggaaaatact
ttgatgccatctgtagtgctaataaacggtatatgtacagaaaatgagctctcatgtaat
actatagaaggttccaaagtaagatatgagattaaagaagaaaattgtgataaatcggtt
tccattttatttgagagtcctataactaattttcccgagaaattcaatacatcttacgat
ggttgtgaagaccagtattcgcgctatctctcagttactacgctagatcctttttcagat
gtaagtggggactgccatacattgttcaaacttaataacgaagaacttaggagcataaaa
ttgagaaatcaaaacattcgtcaaataatttgtaaagaagttaagcgtcctggtaaaaat
cacgatcggctttataagatgcttaaagaagatttgcatggaccttcacaaatcagaaga
gattatattaaagaagtgattcaagaagcatttcggtttaaaaggaaatcgcttgcagaa
tatcttttactaaaaatggatgaattagtccgaatttga
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