KEGG   Lepeophtheirus salmonis (salmon louse): 121127029
Entry
121127029         CDS       T08214                                 
Symbol
Vps50
Name
(RefSeq) syndetin isoform X1
  KO
K23288  syndetin
Organism
lsm  Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:lsm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lsm04131]
    121127029 (Vps50)
Membrane trafficking [BR:lsm04131]
 Protein recycling
  Others
   EARP complex
    121127029 (Vps50)
SSDB
Motif
Pfam: Syndetin_C Vps54_N
Other DBs
NCBI-GeneID: 121127029
NCBI-ProteinID: XP_040578324
LinkDB
Position
12:8394153..8397566
AA seq 650 aa
MTEEALDVSLAQQIVNFDDRAYTDLYEAYSILEKKQVSLDQLLMHLISAVHNTSWKVVFI
HTSLRSNANDNVQETFDEICGRILPDEILTCLLRLCSSLWNIMHSYRKIVDWHLLKSDKY
AYKLKNGLTRVWADVQTKIRVFVLNNDLSKFEIETFLKFMDIIHCLIQVGHLFCGSESDT
LQESIKQQCWNYFVCYHKKKLKEIQRYLDHETWKLTSTRSNFNVSELPEFNHLKDIGIKR
SMIGDSLLDKCPFQNYYLSKYSRSSQLRNTKLADQHYTVDVDSDDSDVPDDLKKDFLEEE
EIIQSIKFTKNREFITETSLAILRLCGSYLELMKLLDRIAERIFGSFCQLIELYAFTVHH
FFTQSLNEHCRDLICSFELNNHLSRIEDSLFASKTLDSPKFNQIDATPENLFGLNEKMIA
VESVLFLGRQLIELKSTISGLISAESVQHYYNASINFLPELRKPIYMSVCGFVSNYDHIT
YLMSRVSWDVKEVQSQHSHYVDVMLREQQMFSIRLDTLEQNANFDIYPEIWGELWNLNLL
HASNTFVDGFSNAKNCSNEGRALMQLDYRHFVMKIEKVTSMKPAPFQNYVTNYIKAFYIP
ETELEDWLKRHTEYKSKHLESLANCIVYKNNRTKKKINSLLADLSVRLRK
NT seq 1953 nt   +upstreamnt  +downstreamnt
atgacagaggaagcactggatgtctcattagctcaacaaattgtaaattttgatgatcga
gcctatactgatctatacgaagcctacagcattttagaaaagaaacaagtatcattagat
cagcttcttatgcatcttatatcggccgttcataatacatcctggaaggtagtctttatt
catacaagtctgcgttcgaatgctaatgacaacgtacaagaaacatttgatgagatatgt
ggtcggattcttcctgatgaaatacttacttgtttgttaaggttgtgtagtagtttatgg
aatataatgcattcttacaggaaaattgttgattggcatttattgaaatcagataaatat
gcatataaattgaagaatgggttaactcgtgtatgggcagatgtacaaactaaaattaga
gtttttgtattaaataatgacttgtctaaatttgaaatagaaactttcttgaagtttatg
gatataattcattgtctaattcaggttggccatcttttctgtggttcagaatcggatact
cttcaagaatctataaaacaacaatgttggaactatttcgtatgctatcataagaaaaag
ttaaaagaaatccagaggtatcttgatcatgagacatggaagttaacatctaccagatct
aactttaacgtttcggaacttcccgagtttaaccatttaaaagacattggaattaaaagg
tcaatgattggtgattctctcttagataagtgtccctttcaaaattattatttatccaaa
tattcacgaagttcacaactaaggaataccaaattagctgaccaacattatactgttgat
gttgattcagatgattcagacgtcccagatgacttaaaaaaggactttttggaagaagaa
gaaattatacaatccattaaattcaccaaaaatagggaattcattactgaaacttccttg
gcgattcttagattatgtggtagctatctggaattaatgaaacttctcgatcgaattgca
gaaagaatatttggatctttctgtcaattaatagaattatatgcgtttactgtgcatcat
tttttcactcaaagtttgaatgaacattgcagagatcttatttgttcattcgaactaaat
aatcatctttctcgaattgaagatagtttatttgcttctaagactctagattcaccaaaa
ttcaatcaaatcgatgctactccggaaaatctattcggattaaatgaaaaaatgattgca
gtagagtctgtactttttttgggacgtcaactcatagaacttaagtctactatctctggc
cttatatccgcggaatcagtacaacattattataatgcgtctatcaatttcttaccagag
cttaggaaacctatatacatgagtgtatgcggatttgttagtaattacgaccatattaca
taccttatgagtcgtgtttcctgggatgtaaaggaggttcaatcccagcatagccattat
gttgatgtcatgttgcgagaacaacaaatgttcagtattcgtctagacacactggaacaa
aatgcaaattttgatatttatcctgaaatttggggagaattatggaatttgaacttattg
catgcctcaaatactttcgttgacgggttttccaacgcaaaaaattgcagtaatgaaggt
cgtgctttaatgcaattggattatagacacttcgtcatgaaaattgaaaaggtgacctcg
atgaaaccagctccatttcaaaactatgtaactaattatataaaagccttctatatacct
gagactgaattagaagattggcttaaacgtcatactgaatataaatctaaacatctggag
tcattggcgaattgtattgtatataaaaataatcgcaccaaaaaaaaaattaatagtcta
ttggccgatctatctgtgagattgaggaaatag

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