Lepeophtheirus salmonis (salmon louse): 121127138
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Entry
121127138 CDS
T08214
Symbol
Tsp
Name
(RefSeq) LOW QUALITY PROTEIN: cartilage oligomeric matrix protein
KO
K04659
thrombospondin 2/3/4/5
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04145
Phagosome
lsm04512
ECM-receptor interaction
lsm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121127138 (Tsp)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121127138 (Tsp)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121127138 (Tsp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121127138 (Tsp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsm04147
]
121127138 (Tsp)
00536 Glycosaminoglycan binding proteins [BR:
lsm00536
]
121127138 (Tsp)
Membrane trafficking [BR:
lsm04131
]
Endocytosis
Phagocytosis
Opsonins
121127138 (Tsp)
Exosome [BR:
lsm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121127138 (Tsp)
Exosomal proteins of colorectal cancer cells
121127138 (Tsp)
Exosomal proteins of bladder cancer cells
121127138 (Tsp)
Glycosaminoglycan binding proteins [BR:
lsm00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121127138 (Tsp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_3
EGF_CA
COMP
EGF
YlcJ
Motif
Other DBs
NCBI-GeneID:
121127138
NCBI-ProteinID:
XP_040578434
LinkDB
All DBs
Position
12:5211406..5215424
Genome browser
AA seq
1062 aa
AA seq
DB search
MPVYLFIKMNSRCLLVNILFYCLNISQSRSSLIDDRSANRNFRKVLNRQTFILALEGVWD
RAHYSIKPNPLLSIEFGDVHKEFQIYLLEDSFTIEFVLRRYTDTIWRKKVSIPELAYIKD
DNRVENDQLLIIFEQNVNSTELQLYYSCHKKTNISIPYEVRGLVSKEQYSKIRLLYDEDI
DLEVMHTSNISTILKEDYACGQDEMQAQQPSSRKYGYSRNKSRETNSFRSKSRGDIPISN
FDEADKLLVVTLRELIEALNRLKDQINLQKVETSSLRESILNCKACQVKKPECSDIPSPC
FHGVKCRNTPDGPVCGECPIGFEGNGHFCERKICKTNPCYSGVTCYPKDNAPYFRCGPCP
IGYRGNGITCYPSQCEKNPPPCYNGVDCFNLDNLPYYKCGACPQGLTGNGTWCSDLDECD
LADPCDVSVTCYNTVPGFRCGPCPVGFSGSEGFIGVGLDFASRQRQVCYDVNECAKNNGY
CVENSLCVNTEGSYYCGPCIRGFVGNQIEGCSNRPGVCPDGTVCDENADCIMPPTASFYI
CKCKVGWAGDGKVCGPDRDLDAWPDIDISCSELKCRRDNCLDTPNSGQEDSDQDGIGDAC
DEDADNDGIPNTPDNCPLVSNPDQADTEVDGDDKRGDACDNCPYLPNINQEDTDEDGVGD
SCDDDIDNDRVPNENDNCPMIVNSDQIDSDDDGIGDACDNCPHIKNTDQQDSDEDTFGDI
CDNNNDADKDGIHDDIDNCPMEPNSDQLDTDSDGIGDDCDRDADNDGIENEKDNCWIAAN
PDQKDSDLDGRGDICDKDTDTDGTPDLFDNCPNNSKIYSTDFRTYQTVVLDPHGDSQIDP
NWVIYNKGAEIVQTMNSDPGLAVGFHRFGGVDFEGTFFVDTEIDDDYVGFIFSYQDNNQF
YTVMWKKNTQTYWQATPFRAVAEPGIQLKLVQSKTGPGQMMRNAMWHTGNTENQVKLLWK
DPRNVGWREKVAYRWLLLHRPKIGLIRLRIFEGEKMVADSGNIFDDTLKGGRLGVFCFSQ
EMIIWSDLVYRCNDHVPEVIYNELPERIKTRVHIDKSKPTSA
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtatatttattcatcaaaatgaattcaagatgtcttcttgtaaatatattgttt
tattgtctgaatatttcacaaagcagaagttctcttattgatgaccgaagtgctaatcgg
aactttcgcaaagttttaaatcgacaaacctttatcctagctcttgaaggtgtttgggat
agagcacactattcgataaaacccaacccacttctttctatagaatttggagatgtccat
aaggaatttcagatttacttattagaagattccttcacaattgaattcgtgttaagacgt
tatacagacactatttggagaaaaaaggtttcaatccctgaattggcttatataaaggat
gacaacagagtcgaaaatgatcagctgttaattatttttgaacaaaacgttaattccaca
gagttacaactatattatagctgtcataaaaaaaccaacatttcaataccttatgaagtc
cgtggattagtatcaaaagaacaatattctaaaataagactcctttacgatgaggatatc
gacttagaagtaatgcatacttcaaatattagcactattttaaaagaagattatgcatgt
ggtcaagatgaaatgcaggcacagcaaccttcatcgagaaaatatggatactctcgaaat
aaaagtcgtgaaactaatagttttaggtcaaaatctcgtggagatattcctatttctaac
ttcgatgaagcggataagttactagtggttacattacgtgagcttatagaagccttaaat
aggttaaaggatcaaatcaatcttcaaaaggtagaaacatcttcccttagagaatcgatt
ctaaattgtaaagcctgtcaagtaaagaaaccagagtgttcagacattccttctccttgc
tttcatggagtaaagtgtcgaaatactcccgatggtcctgtttgtggggaatgccctatt
ggatttgaaggcaacggtcatttttgtgagagaaaaatttgtaaaacaaacccatgctac
tctggagttacatgctaccccaaagataatgcaccatacttcagatgtggtccatgtcca
attggttatcgcggaaatggtattacttgttatccatctcaatgtgaaaaaaatcctcct
ccttgctataacggtgtagattgttttaatttggataatcttccttattacaaatgtggt
gcatgtccacaagggttaacaggaaatggtacttggtgtagtgatcttgatgaatgtgac
ctagctgatccatgtgatgtctcagttacttgttataatacagtacccggcttccgatgt
ggaccatgtccagttggattttcaggttcagaaggttttattggagtaggacttgatttt
gcatcccgccaacgccaagtttgctatgatgttaatgaatgtgcaaaaaataatggatat
tgtgttgaaaattctctttgtgtaaatacagaaggatcatattattgtggaccatgcatt
cgaggttttgttggcaatcaaattgaaggatgtagtaatcgtcctggagtatgtccagat
ggaacagtttgtgatgaaaatgcagattgtataatgccaccgactgcttctttctatatt
tgcaaatgtaaagtaggttgggcaggggatggaaaggtttgtggtccagatcgggaccta
gatgcctggcctgatatagatatttcatgttctgagttaaaatgccgaagggataattgc
ttggatacccccaactcaggacaggaagattcagatcaagatggtattggagatgcatgt
gatgaagatgctgataatgatggtatcccaaacacccctgataactgccctcttgtgagt
aacccagatcaagctgatacagaagttgatggtgatgataagcgaggagatgcttgcgat
aattgtccatatctgcctaatataaaccaagaagacacagatgaggatggcgttggagac
tcatgtgatgatgatatagataatgatagagtacctaatgaaaatgataactgtcctatg
atagtaaattcagatcaaatcgactctgatgatgatggtattggagatgcatgtgataat
tgcccacatataaaaaatacagatcagcaagactcagacgaagacacatttggggatatc
tgtgataataacaatgatgctgataaggatggtattcacgatgatatagacaactgccca
atggaacctaattcagatcaattggatacagactctgatggaattggtgacgattgtgat
cgagatgcagataatgatggaatagagaatgaaaaagataattgctggattgcagccaac
cctgaccaaaaagattctgacttagatggtcgaggagatatttgtgataaagacactgat
actgatggaaccccagatttatttgataattgtccaaataattcaaaaatatactctact
gattttagaacttatcaaactgtggtgttagatcctcatggtgattcacaaattgatcct
aattgggtcatatataataaaggagcagaaatcgtacaaacaatgaattctgatcctggt
ctggctgttggttttcatcgctttggtggagttgattttgaaggaactttctttgtggat
acagagatagatgatgactatgttggttttattttttcttatcaagacaataatcaattt
tacactgtaatgtggaaaaaaaatactcaaacatattggcaggcaacgccgttccgtgcc
gttgctgaaccaggtatacagctcaaactagttcagtcaaaaactggaccaggacagatg
atgagaaatgcgatgtggcacacaggaaacacagaaaatcaggtaaaattactttggaaa
gatcctagaaatgtaggatggagggaaaaggttgcttatcgatggctacttcttcatcgc
cccaaaattggtttgatacgtttacgaatatttgagggagaaaaaatggtagctgattct
ggaaatatctttgatgatacactaaaagggggacgcttaggtgtgttttgtttctcacaa
gaaatgattatatggtcagatcttgtttatcgatgcaatgatcatgttcctgaagttatt
tataatgagctcccggaaagaataaagacccgtgttcatattgacaaatcaaaaccaacg
tctgcttaa
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