Lepeophtheirus salmonis (salmon louse): 121127164
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Entry
121127164 CDS
T08214
Name
(RefSeq) uncharacterized protein
KO
K23195
transcriptional repressor CTCF
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsm03000
]
121127164
03036 Chromosome and associated proteins [BR:
lsm03036
]
121127164
Transcription factors [BR:
lsm03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121127164
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121127164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_15
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451_C
zf-C2H2_11
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
121127164
NCBI-ProteinID:
XP_040578460
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Position
12:9163190..9167469
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AA seq
694 aa
AA seq
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MSSSETISEEVGYPSRAMRPSVGEKTLGGHYFVDESTGQYYYQEVGGEGLSVVEEEEEEE
GASGSVSGSADKSGSSGASVMLNAGGDQYQTVTIVPSDTNPGEVSYVLIVQQPQEEERVE
AELKEEEELKEEEEEESKKGGKAFPSVSSGEKQKKKVVALSSLASLVPLAAPRVMLSECG
EGSVGPGVYDFDEGNEFGGSGVLESGQEGEEGGVELEVETVSDGKRKSLKVNKRSQCVSQ
AHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHKC
KFCESCFTTSGELVRHVRYRHTHEKPHKCSECGYKSVELSKLKRHMRCHTGERPFQCPHC
TYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCEFCPTT
CGRKTDLRLHVQKLHTSEIPMHCKMCGKMFPDRYTLKVHKKTHDGEKCFKCDLCPYSSIS
QRHLESHMLIHTDQKPYLCDQCDQSFRQKQLLKRHQNLYHNPNYVPPEPKEKTHECHECG
RSFRHKGNLIRHMALHDPESSAQEKALALKMGRQRRIQIIDGQQVEVLTGDEDDEVGEDD
VEAVDSEESDKVMSVESHDGSQYVVLEVIQLGNSKSHSESNSSIKIIEGKTAAIQDSNIC
DVSSLRAPNEEYSNLAKKRNDMATCFGFDDDEDD
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcatcggagacgatctccgaggaagtgggctacccttccagggccatgagacca
tcggttggggagaagactttgggaggtcattacttcgtagatgagagcactggacaatat
tactaccaggaagtgggaggagagggattgtcggtcgtggaggaggaggaggaagaggag
ggtgcctcgggttccgtgtctggttcggcagacaagagtgggtcgagtggggcaagtgta
atgctcaacgcgggtggggatcagtaccagacggtgacgatcgttccctcagacacgaac
cctggagaggtgtcctacgtgctgattgtgcagcaaccccaagaggaggaaagagtggag
gcggagctcaaggaggaggaggagctcaaggaggaggaggaggaggagtcaaagaaggga
ggaaaggcatttccttccgtctcaagcggagagaagcagaagaagaaggttgttgctctc
tcttctcttgcttctcttgttccactagctgctcctcgggttatgttgagcgagtgtgga
gagggttctgtgggtcctggtgtatacgactttgatgaggggaacgagtttggagggagt
ggagtgttggagagtgggcaagagggggaggagggaggggtggagctggaggtagagact
gtgtcggatgggaagaggaagagcctcaaagtaaataagcgttcccagtgtgtgtcccag
gctcacatgtgcaactactgcaactacaccactcctaagcgttatttactttctcgacat
atgaaatcccactcagaagaacgtcctcacaaatgctcagtctgtgaacgaggttttaaa
actcttgcatccctacaaaaccatgtcaacacgcatactggcactaaacctcataagtgt
aaattttgtgagtcttgctttacaacttcgggggagttagtgcgtcatgtaagatatcgt
catactcacgaaaagcctcacaagtgctctgaatgcggatataagagtgttgaattaagc
aagcttaagagacatatgagatgtcacacgggagaacggccatttcagtgtcctcattgt
acatatgcctcacctgacacctttaaactgaaaaggcatctgcgaatacacactggagag
aaaccctacgagtgtgacatatgccatgcacgatttacacagagtaattcgctcaaagct
catagattaatacatacaggtgataaacctgtgtttcaatgtgaattttgtcctactact
tgtggtcgtaaaacagatcttcgccttcatgtacagaaacttcatacctctgaaatcccg
atgcattgtaaaatgtgcggtaaaatgttccctgaccgctatactctcaaagttcataaa
aagactcatgacggagaaaaatgctttaaatgtgatttgtgcccgtattcttcaatatca
caacggcatcttgaatctcatatgctcattcatactgatcaaaagccctatttatgcgat
cagtgtgatcaatcttttcgtcagaaacaactattaaaacgccaccagaatttatatcat
aatcctaactatgtacctcctgaacctaaagagaaaactcacgagtgtcatgaatgtggt
agatcttttcgtcataaaggtaatttgattagacacatggcacttcacgatcctgagagt
tctgctcaagaaaaagctcttgcgcttaagatgggccgccaaagacgaattcaaattata
gatggacaacaagttgaagtacttactggagatgaagacgacgaagtaggagaagatgat
gttgaagcagttgattcagaagaaagtgataaagtcatgtcagtagagagtcatgatggt
tctcagtatgttgttttggaagttattcaattaggaaatagcaagtctcatagtgaaagt
aacagttcaataaaaattatagaaggtaaaacagcagctatacaagacagcaacatttgt
gatgtatcaagcttgagggccccgaatgaggaatattctaatttagcgaagaaaagaaac
gacatggctacttgcttcggatttgacgatgatgaagatgattaa
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