Lepeophtheirus salmonis (salmon louse): 121127180
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Entry
121127180 CDS
T08214
Name
(RefSeq) LOW QUALITY PROTEIN: patched domain-containing protein 3-like
KO
K24682
patched domain-containing protein
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lsm04990
]
121127180
Domain-containing proteins not elsewhere classified [BR:
lsm04990
]
Other domain-containing proteins
Patched domain-containing proteins
121127180
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
121127180
NCBI-ProteinID:
XP_040578462
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All DBs
Position
12:4526239..4554040
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AA seq
951 aa
AA seq
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MRELRLEFIDDSLKFIFSEVGIIVGKHPGYFVIIPLLLTALAATGFQRLHFQSDPEYLFS
PSDGESHYERKVLETYFNTNYSDFEPSRSSRVGRFGKLIISSKDNGSILRMKIWEEIESL
NFLIENFEVFSLKECDEVKSSMKLNFKDLCASHQGKCWRNKILDLGKHITEIESKEIKLT
FPLWFDPETFQGYTFNFFFGGVILRNDSTIKSVTAVSLFYFLNSQTSKDIERGAKWEGMF
LATVEAQSFSYIKVARFSSLTLEVELENNTNSVIPFFALNIGIMIAFCIITCMMTDWVKS
KPLLGLFGVISAIMATLFSFGFIIYCGVPFIGINLAAPFLMLGIGIDDTFVMLGSWRRTS
VHETVPARLAQTYRDAAISITITSITDMLSFWIGIITPFPSVRIFCLYTGACVAFTYLWH
ITFFGGCMAIAGYAEKSNRHSLTCLTVIPKSKAESKNWLYRIFCSGGISPDDPFNKKDNA
ENAIMVIFRDYVARAINNGYFKIFVLVFFYVYLVIAGWGVSNIQEGLERKKLARYDSYSV
EFYEMEDTYFREYPYRVNVVLSGHFNYSNLQVQNDVEKLLKKLENSSFVDHVYTESWYRD
FLDYVKRNKDFAELDISTEENFISTLKEVYLGSGFTHYVKDVHFSTDNKSIIASRFLIQG
TKIYNTNDEKKFVQELRYVCLTSNYNVTVFHPYFIYFDQFLMVLPTTIQCITVAAFVMMF
ISLIFIPNPVCSLWVAFSIISIEVGVVGFMTLWGVGLDSISMINLIMCIGFSVDFSAHIS
YHYMSCEKSFTDKERIRDSMYALGLPIVQGAISTILGVVGLALAPSYVFITFFKMVFLVI
VLGALHGLLVLPILLSIFGPSSFKKCKKERKEEIQPSTDLETLPYSTTLNENTQNSMKDY
SQYQIKIPRPSTKVDKYFDTTKLHEMYTNTGYESEEIYGNDYSIKKDYLTN
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgagagagcttcgcttagaatttattgatgatagtcttaagttcattttttccgaagtt
ggaataattgtcggcaaacatcctggatattttgtcattataccattacttttaacagcg
ttagctgctactggattccaacgccttcattttcaatcagaccctgaatatttattttct
ccaagtgatggtgaatcgcattatgaaagaaaagttctagaaacttattttaataccaat
tatagtgattttgaaccaagtagatcctcaagagttggaagatttggtaaattgataatt
tcatcaaaggataacggttctatattaagaatgaaaatatgggaagaaatagaatcctta
aatttccttatcgagaattttgaagttttttctttaaaagaatgcgatgaagtaaaatca
agtatgaagttgaatttcaaagatctatgcgcttctcatcagggtaaatgttggagaaac
aaaatattagacctgggaaaacatattacagaaattgaatctaaagaaataaaattaact
ttccctttatggtttgatccagaaacattccaaggatatacatttaactttttcttcgga
ggtgttattttaagaaacgattccaccataaaaagtgtcactgctgttagtcttttttat
tttttaaattctcaaacttcaaaagatattgaaagaggagccaagtgggaaggaatgttt
ctggccacagttgaagcccaaagttttagttatattaaagttgctcgtttttctagttta
acattagaggttgaacttgagaataatactaattctgttattcctttttttgccttgaac
attggtataatgattgcattttgtattattacgtgtatgatgacagattgggtgaaatca
aagcctttgctaggactatttggagttatatctgcaataatggctacactattctctttt
ggatttatcatttattgtggtgttcctttcattggcataaatttagctgctccattttta
atgctgggtattggaattgatgatacgtttgtgatgctcggttcttggagacgtacatca
gttcatgaaacagttcctgcaagacttgcacaaacgtatcgtgacgcagccataagcatt
acaattacaagtattactgatatgttaagtttctggattggtataatcacaccatttcct
agtgtaagaatattttgtttatacaccggagcatgtgttgcttttacttacctgtggcat
attactttttttggtggttgtatggctatagctggctatgcagaaaaatcaaatagacac
tcgttaacatgtttgacagttattccaaaatccaaagcagaaagtaaaaattggttgtat
agaatattttgtagcggtggaatatctcctgatgatcccttcaataaaaaagataatgca
gaaaatgccattatggttattttcagagactatgtagccagagcaatcaacaatggatat
tttaagatatttgtacttgtatttttttacgtttaccttgttatagcaggatggggagtt
tccaatattcaagaaggtttagaacggaaaaaactagctcgttatgactcttactcggtt
gaattttatgaaatggaggatacttatttcagagaatacccatatagagttaatgttgtg
ttaagtggacattttaactactcgaatttacaggttcaaaatgatgtggagaaattattg
aaaaaattagagaactcttcatttgttgatcatgtgtatactgaatcatggtacagggat
ttcttagattatgtgaaaagaaataaggacttcgctgaattagatatttctacggaagaa
aattttatatcaacactaaaagaagtatatttaggttctggatttacacattatgtaaaa
gatgttcattttagtacggataataaaagtattatagcgtcacgatttttaatacaagga
acaaaaatttataatacaaatgatgaaaaaaaatttgtacaagaattaagatacgtttgc
cttacttctaattacaacgtcactgtatttcatccttattttatctattttgaccaattt
cttatggtattacctactaccattcaatgtatcacagttgcagcgtttgtaatgatgttc
atttcacttatatttattccaaatcctgtttgctctttatgggttgcttttagcatcatt
tcaatagaagttggagttgtggggtttatgactttatggggagttggcttagactctatt
tccatgattaatcttattatgtgtattggctttagtgttgacttttctgctcatataagc
taccactatatgtcatgtgaaaaaagctttacggataaagagagaatacgagattcaatg
tatgctttaggacttccaattgtacaaggagcaatttcaaccattcttggggttgttggc
ttagcattagcaccgagctatgtgtttattacattttttaaaatggtttttcttgttatt
gttctcggagcacttcatggtttattagtactacctattctactctcaatctttggacca
agctcttttaaaaaatgtaaaaaagaacgtaaagaagaaatacagccatcaacagacctc
gagacgttaccatattcaaccaccttgaatgaaaatacacaaaatagtatgaaagattat
agccaatatcaaatcaaaattccaagaccttctactaaagttgataaatattttgataca
acaaagctacatgaaatgtatacaaatacgggttatgaatctgaagaaatctacggtaat
gactattcaatcaagaaagactatttaactaattaa
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