Lepeophtheirus salmonis (salmon louse): 121127283
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Entry
121127283 CDS
T08214
Name
(RefSeq) uncharacterized protein isoform X1
KO
K09276
Y-box-binding protein 1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsm03000
]
121127283
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121127283
03041 Spliceosome [BR:
lsm03041
]
121127283
Transcription factors [BR:
lsm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
121127283
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
121127283
mRNA cycle factors
Common to processing body (P body) and stress granule
121127283
Spliceosome [BR:
lsm03041
]
Common components
Common spliceosomal components
General mRNP proteins
121127283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
Motif
Other DBs
NCBI-GeneID:
121127283
NCBI-ProteinID:
XP_040578542
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All DBs
Position
12:573550..576199
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AA seq
300 aa
AA seq
DB search
MGDEEKSVVSDETRRGVEEAECGCEDSLDACLEGVDAEGKGKEVVARKVLGTVKWFNVKS
GYGFINRNDTKEDVFVHQTAIVKNNPKKMVRSVGDGEVVEFDVVVGEKGNEASNVSGPEG
SAVKGSPYAADRRRGGYRRGGRGYYPRRGGRAPARSRKEGEELSVEGDGASGTGEGPESA
KGARFKSRFPRRGTFRRRGQVGRSSTEKHSPEESRSLFAPEASHEQDPHVDGFIRRGGFR
GYRARGPRGGYRGGYQLRGRGFNGYRGTTRRGRGRRGVRAGRGNRGGNVGGADYNVESYA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatgaggagaagagtgtggttagtgatgaaacgaggagaggagtggaagaagcg
gagtgtggttgcgaggattctttggatgcgtgcctggagggtgttgatgcggaggggaag
gggaaggaggttgttgcgcggaaggtgcttggaacagtgaagtggtttaatgtgaagagc
gggtacgggttcattaaccggaacgacacgaaggaggacgtgtttgtgcaccagactgcc
attgtgaagaacaaccccaagaagatggtgcgttctgtgggggacggggaagtggtggag
ttcgacgtggtggtgggggagaaggggaacgaggcgtcgaatgtatctgggcccgaggga
tctgcggtcaaggggtctccttatgccgcagaccgtcgtcgcgggggctaccgtcgtggt
gggcgaggctattatccccgtcggggagggcgtgctccggctcgctctcgtaaagaaggg
gaggagttgagtgtggagggcgatggcgcctccgggactggagagggcccagagtctgcc
aagggcgccaggttcaagtctcgctttccgcggagaggcacttttcgaaggcgtggtcaa
gtggggcggtccagcacggagaagcactcgccagaggagagtcgctctctgtttgctcca
gaagcatctcatgaacaggatcctcatgtcgacggattcattcgtagaggtggatttcga
ggttatcgtgcaagaggaccaagaggtggatacaggggaggatatcaactcaggggtcgt
ggatttaacggatatagaggtacaacaaggagagggagaggtcgacgtggagtaagggct
ggccgtggcaaccggggaggaaatgtagggggtgccgactacaacgttgaaagctatgct
tag
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