Lepeophtheirus salmonis (salmon louse): 121127415 Help Entry 121127415         CDS       T08214                                  Symbol Nup188 Name (RefSeq) nucleoporin NUP188   KO K14311   nuclear pore complex protein Nup188 Organism lsm  Lepeophtheirus salmonis (salmon louse) Pathway lsm03013   Nucleocytoplasmic transport Brite KEGG Orthology (KO) [BR:lsm00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     121127415 (Nup188)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:lsm03019]     121127415 (Nup188) Messenger RNA biogenesis [BR:lsm03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      121127415 (Nup188) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Nup188_N-subdom_III FlbT Motif Other DBs NCBI-GeneID:  121127415 NCBI-ProteinID:  XP_040578690 LinkDB All DBs Position 13:15068108..15073968 Genome browser AA seq 1685 aa AA seqDB search MSHSSLRGLFTLVSGVGGVDASTAVLKKEFEEREKKLFAGVSFTAKGTSTKRKNLSENFE SFLSKLGSFLDKGPEDTWDILSSYLSGDFRGTRDSLKVLINQEHLQKPLIVDIWQFYRAE RLYLLQVLKQILSHQSNASHKHYDAFKYLLDLWKKDSLKESLISQLKSVFEEEWNKSSDL KFTWIKYNLREKVELLQLILLHFHGSSFSESVGNTDLKCLFNLFRNKGMGPSLTEKIDPN LVASVGQLQSLISIYLMNLPKLTLLQNDESVKAKVNDCLDYSLISSLGSSPYHGPIMLAW MLSRYLRNGELSQPEISIGERAVQLRVLHYLNSLMSNDVITNQTVKSIAAGVCYSILSIL ITVFDPDKMGLGMDIHNATQLVLTESLIASNFWKQGFDTGLGLVLGGYLTKFPVTLKPVL EICTSLAEASPESSKEVINVFQNLTSYAEPVENVNCGILRPFGDKWMSTEDRYPYLNSQT IVIPAKSKALSDGILFQWKVHMSGWQLFLCEIDCLIKQVSHGAKNVNEAKLSSVTAITKL TDKILHSAVGESIIHSLDHFIECFFILIEKFVQAPSPPIDLLANCVSCLSVVAKVSPQKV WDRLASTGLFPYVARSNLDILGTSSNADINPGVIGALLAQQECVDGEYPLTNAFLDLLLH TTTSGSNIKISPSLIYIVQEMLPSFQQWRFAHSTNKPIFGQKILKVCFAIISSSTASDED LSNSDIKKNNFHPDKELLCEALLSPAPCETLFNLVGIGDKAIQSILEDQSSWECGLGTEL VKLVDLVLCILEVLIRSRQNSTQDFQEILCSPFSQNVHHQPQPHFLLTIAHYIYHFQNPN IPISAVKLLSTVAGVFPMSLLACLGQEAEAFRDVLISRLESHTEDVRLKIAIVEFFSACI ENQPGLVQLLIGGEKKLDETQSDKKEGDKSKDNLKASWSSMDKGCLKSVLTVMENDTKNQ PDLLMVILNLVLKLWDHQRIVAVSFLKKQKSFWKNLSSPLFDEKNEGLNFTKKKKLCALI LRIFSAEIFAFGGKVDAELKSVLENFVDEKSNHLNKWNKQILEDNDAFLLGAWKTFLVIL TKDQPISISPVQCHFVAKGLIEGVKMGLSTSPKGIRITTSLSEMTLILTQKWMTKCSGNI DEWMKDHKQILEELDSSFDNIHVRTKSSILALAHTALKISSFKIEKEDKALASWIQPAVN LVLLSIKDFAGKSSNLSKEEMKMNIQVPILAVNLLKNLIQRLSSSPLCWTRAWRESILAQ SLISILEHCLRHRSASGLIISLLDLLIVVITTSEECCHSLLILDLSQSIWFPLSDINPFQ TVPSSSDDTYSEDWYSVFRLSLRLAANVLRIGKQYAVNESITAVSLLQDRVTSFLNIIPP MNQVKGGVHLELTSSAVSFISLLSPYYKRWQLQHPSSFFHFYHRISSLIHAGVSLLIRPS LLGAILLNCQDTSENNSQCLNSNRVRRLSSTDQETMEHSSPETVKIQNCLLDIISSCLKM FRSLSPDMSSFVSVEDLIDPTQWESLVTITFSSPTFDEEHASERFLTYGILISLANFCVR SITRSDRSPSPSSSGERDLGLPDPDRRHLLLVFEQSVVLILVQSLLSLRNPEVSNRDKQL LRRELGAELGSFIESMRRFVQRSSKSPIPQINRRTGGTSPASLGMHKSYDCFIKMISSVV LNVYK NT seq 5058 nt NT seq  +upstreamnt  +downstreamnt atgtctcattcctccttgagaggattgtttacacttgtctctggtgtgggtggagtggat gcaagcaccgccgttctcaaaaaagagtttgaggagcgtgaaaagaaactctttgcaggg gtctcattcactgcgaaaggaacttccaccaagagaaagaatctctctgaaaactttgag tccttcctctcaaaactcggatcctttctggataagggtcctgaggatacctgggatatt ctatcttcatatctaagtggcgattttcgaggcacacgagactccttaaaggttctgatc aaccaagagcatcttcaaaagcctctaatagtggatatttggcaattttaccgtgctgaa agactgtacttacttcaagtccttaaacaaattctcagtcatcaaagcaacgcttcacac aagcattatgatgcctttaaatatcttttggacctttggaaaaaggattccctgaaggaa agtcttatttcccaattaaaaagtgtatttgaggaggaatggaacaagtcctcagacttg aaatttacctggatcaaatacaatttgagagaaaaggtggaattacttcaactcatactt cttcatttccatggctcatctttttctgagagtgtggggaatacggacttaaaatgtctt ttcaaccttttccggaataaaggaatggggccctcattaacggaaaaaattgatcccaat cttgttgctagtgtggggcaacttcagtctcttatatctatatatctcatgaatttacct aaattaaccttattgcaaaatgatgaaagcgttaaggcaaaagtaaacgactgtttagat tattcactcatttcctcacttggatcgtctccatatcatggacccattatgttggcatgg atgttgtctagatatttgaggaatggggaattgtcccaacctgagatatctattggagaa agagccgttcaactcagagtgttgcattatctgaattctttaatgagcaatgatgttatt actaatcaaactgtcaagtctattgctgctggagtatgctactccattttatcgatactc ataacagtgttcgatcctgataagatgggactcggaatggatattcataatgctactcaa ttagttctgacagagagcttgatagccagtaacttttggaagcagggctttgatacagga ctaggactcgtcctgggtggttacctcactaaatttcctgtaactctcaagcccgttctt gaaatctgtacgtctcttgcagaagcctcacccgaaagctctaaagaggtcattaatgtt tttcaaaatttaacttcctatgcagagcctgttgaaaatgtaaattgcgggatattgcgt ccgtttggagataagtggatgagtacagaggatcgctatccttatttgaattctcaaacc attgttatacctgcaaagtcgaaagccctaagcgacggaattttgtttcaatggaaagta catatgagtggatggcaattgtttttgtgtgaaattgattgcttaataaagcaagttagt catggagcaaagaacgtgaatgaggcaaaattgtcatctgtaacagcaatcacgaaatta accgataaaattttacactctgcagttggagagagcataattcattcattagaccatttc attgaatgtttttttattctaattgaaaaattcgtacaagctccttctccgcctatcgat ctcctagctaattgcgtgagttgtttgtcggtggttgcaaaggtatctccacaaaaagta tgggacagattagcctcgactgggcttttcccctatgttgcaaggtctaatttagatatc ttaggtacatcaagtaatgctgacattaaccctggtgttattggagcccttttggctcag caagagtgtgttgatggagagtatcccttgaccaacgcatttcttgatctcttacttcac accacaacgagtggtagcaatatcaagatatctccctcattgatatacatagttcaagaa atgcttccatcatttcaacaatggagatttgctcactctacaaataaacctatatttggt caaaaaatattgaaagtctgctttgccatcatatcttcatcaactgcctctgatgaggat ctctccaattccgatattaaaaaaaataattttcatccagataaggagctcttatgtgaa gctttgttgagtccagccccttgtgagactctttttaatttggtaggcattggtgataaa gcgatacaatcaattttagaagatcagtctagttgggaatgtggacttggaactgaattg gtgaaattggttgatttggttctttgtattctggaagttctcattagaagtagacaaaac tcaactcaggattttcaagagatcctttgctctcccttctctcaaaatgttcatcatcag cctcagccccattttctactcacaattgcacattacatataccactttcaaaatcctaat atccctatatctgctgtcaaattgttgtccactgttgctggtgtattccccatgagctta ctggcatgtttaggccaagaagctgaagcatttagagatgttcttatttcgagattggaa tcacatactgaggatgttcgtcttaaaatagcgattgttgagttcttttctgcctgcata gaaaatcaacctggtttagttcagcttctcattgggggtgaaaagaaattagatgaaacc cagagtgacaaaaaagaaggagataaatcaaaagataatctcaaggcatcatggagttcc atggataaggggtgtctgaaatccgttcttacagtcatggaaaacgatactaagaatcaa ccggatcttcttatggtgatattgaatttggttttaaaactatgggatcatcaaaggatt gttgctgtttcatttctaaagaaacaaaaaagcttttggaaaaacttgtcctctccgctt tttgatgaaaaaaatgaaggcctcaactttactaaaaagaaaaaactttgcgcactaata cttcgaattttctctgctgagatatttgcatttggaggaaaagtagatgctgaattaaag tctgttcttgaaaattttgtcgatgaaaaaagtaatcatttaaataaatggaataaacag atccttgaagataatgatgcatttcttcttggagcctggaaaacatttttggttatatta accaaggaccaacccatctctatttctcctgtacaatgtcattttgtagctaagggtctt atagaaggcgtcaaaatgggactgtctacctctcccaaaggcataagaataactacaagt ctaagtgaaatgactttaattctgactcaaaagtggatgacaaaatgctctggaaatatt gacgagtggatgaaagatcacaagcaaattttggaagagctcgattcgtcctttgataac atacatgtacggacaaaaagttcgattttagccttagctcatactgctcttaaaataagt tcatttaagattgaaaaagaggataaagctttagcttcgtggatccaacctgcagtaaat cttgtattgttgagcattaaggattttgctggaaagtcttcgaatctttctaaagaggaa atgaaaatgaatattcaagttcctattttggccgtgaatctcctgaaaaatcttatacag cgattgtcgtcttccccactttgttggactcgtgcttggagggagtcgatacttgctcag tcattgatcagtattttagaacattgtcttcgtcatcgttcggcctctgggctcatcatt tctctgttagatctacttatagttgttatcactacatccgaagaatgttgtcattcttta ttgattttagacttaagtcagagtatttggtttcccctctcggacataaatccctttcag accgttccttcaagttcagatgatacatacagtgaggactggtattctgtatttaggctt agtctgagactagcagctaatgtgctccgcattggtaaacaatacgcagtaaatgagtcc attaccgctgtttcattacttcaagatagagtaacctcatttcttaatatcattccacca atgaatcaggtgaaaggaggtgttcatttggaattgacctcctctgctgtttccttcata tcccttctttcaccctactacaaacggtggcaacttcaacatccttcttcatttttccat ttttatcatcggatatcttctcttatccatgcaggagttagtcttttgattcgaccatcc ttactaggtgccatattattgaactgccaagatacttctgagaataacagtcaatgtctt aactcaaatagagtgcgacgattatcctcaaccgatcaagaaacaatggagcattcttct cccgaaactgtcaaaattcaaaattgccttctcgatataattagttcatgcttgaaaatg tttcgttcactttctcctgatatgagctcattcgtatcagtggaggacttgattgaccct acgcagtgggagagccttgtgaccattactttttcatctccaacttttgatgaagaacat gcctcggagcgatttcttacttatggtatattgatctcattggcaaatttttgtgttcgc tctattactcgaagtgacagatctccatcaccttcttcatcaggagagagagatcttggc ttacccgatccagatcgtcgtcatctattattagtttttgaacaatccgttgttcttatt cttgttcaaagtcttttaagccttcggaatccagaggtttctaatagagataaacagtta ttaaggagagaactaggagctgagcttggatcctttattgaaagtatgaggagatttgtt cagcgctcatccaagtctcctatacctcaaataaatcgaagaactggtggtacatctccc gcttcccttggaatgcataaatcttacgattgtttcatcaaaatgatttcctctgttgtt cttaatgtatataaataa

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