Lepeophtheirus salmonis (salmon louse): 121127448
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Entry
121127448 CDS
T08214
Name
(RefSeq) ATP-dependent DNA helicase Q5 isoform X1
KO
K10902
ATP-dependent DNA helicase Q5 [EC:
5.6.2.4
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsm03400
]
121127448
Enzymes [BR:
lsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
121127448
DNA repair and recombination proteins [BR:
lsm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
121127448
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
SRI
Nucleocap_ssRNA
Motif
Other DBs
NCBI-GeneID:
121127448
NCBI-ProteinID:
XP_040578747
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All DBs
Position
13:complement(38420635..38424896)
Genome browser
AA seq
1050 aa
AA seq
DB search
MATTTNHDGDRIEQALNSFFGHPSFRSKEQEAAIRAIVEEEDCERDVFVSMPTGSGKSLV
YQLPGVLLPKGRITIVVSPLIALIKDQLEALQKKKIHAESLNSKMGEQERKRVLRDIHAK
CPDTRFLYVTPEQCATNTFKSILEKLVKFNVLGYFVIDEAHCVSQWGHDFRPDYLKLGQL
RKIINKTRVLALTATASKEVAADVFKQLKMKKEPLVFKVPCFRSNLFYDVVFKESIQYEY
EDLKGFVLECLGEGVLKKSTLGKNAPCGIIYCRTRDGTLQIASQLTKRGIPTLAYHGGLK
DSERSRVQESWADGKVPVIAATISFGMGVDKATVRFVAHWSVPQTIAGYYQESGRAGRDG
KPSFCRIYHSREEKGAIAFLLQQGSNKAKSERRKEVAKSAIKSFEKMVKYCEGLTCRHFV
FSRHFNDDCKPDCDKRCDVCVSLKTVEKKVEAFHSNSLRNNNFRSAPEAKANSNELYGGG
REGNKRHFESYDSDGGDSGHDYEIAEKRAKKDREILIKKEFRNRKKGKSSGKDDSKEDEA
IRFAKVKGAEFTKNKIAGLEVRARESYLGLLETNIRLNYDTAIKYGALKEEEKKLSNQDI
LQIAVNEEYQIFTSNKVVTMYRRGMAFLMAAVKKDTDGWNAHSCVIKYDPSENNHQSLSK
LASGIKKEEKKKSSETTSGNVPKIISKGGFKIKRDPLTQVGITNYFSKSEPKVQSKWKSL
GLDDDEDNDQTNNQGDEEIEENPSTSSSNINFYNEANNDDKKSFSSESPISYKAAPSESS
KVSSPIEEEKEEEVTEEATFIEREKSACYEDSENQTVEDFKERLEKEYSNFEEDYTTINN
IQSSSRRDSPKSDVVNPETFSKLEETISKLQKQMAESEDSINYELLNHSNQEEGSPFKLD
QNEIETLSPEASNKKSSNSGSSSSMSSRKHRPKIKVKVEDITKTKKERRGPSSSRTSSES
SSKNADKKSKKDAANEIVKVLVPHYKSGKIMSKEVFKFAARELTHVLLDAKVKSSSYGNY
VSKFFKRHCSIVSIDDARTKINHFKSKIIV
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggcaactactactaatcatgatggcgatagaatagaacaggccctaaattcttttttt
ggccatccgtcctttcggtccaaggagcaagaggccgcaattcgtgccattgtggaggaa
gaagattgtgagagggatgttttcgtttctatgcccacgggctctggaaagtccctcgtc
tatcaactccctggcgttctccttccgaaaggccgaatcactattgtcgtatcgcctctg
attgctctgatcaaggatcagttggaagccttgcaaaagaagaaaatccacgctgaatcc
ctcaactccaaaatgggagaacaggagcgtaaacgagtacttcgagacatccatgccaaa
tgcccagatactcgcttcctctatgtcacacctgagcaatgtgcgacaaataccttcaag
tccatactcgaaaagctcgtaaagttcaatgttctgggatactttgtcatagacgaggct
cattgcgtctctcagtggggtcatgactttagaccagattacctcaaactaggacaactc
cgtaaaattattaataaaactcgagttttagcactcactgcaacggcctccaaggaggtt
gcagcggatgtcttcaagcagctcaaaatgaaaaaagaacctctcgtattcaaagtccct
tgctttagaagtaatttgttctatgatgttgtgttcaaggaatctattcagtacgagtac
gaggatttaaaaggatttgttcttgaatgcttgggagaaggtgtcttgaaaaagtcgact
cttggaaagaatgcaccttgtggaatcatttattgtcgaacaagagatggaacgctccaa
attgcgtcacaattgactaaacgaggaatccctactcttgcatatcatggtggtctaaag
gattccgaaagatctcgtgttcaggaatcttgggctgatggtaaagtcccagtgattgca
gcaaccatttcctttggtatgggagtggataaagcaacggttcgatttgttgctcattgg
tccgtacctcagaccatagcaggttattatcaagagtctggacgtgctggacgtgatggg
aaaccatcattttgtagaatctatcactcaagagaagaaaaaggtgctattgcatttcta
cttcaacaaggttccaacaaagccaagtccgagcgtcgcaaagaagtagctaaaagtgca
attaaaagttttgaaaaaatggtaaaatattgcgagggacttacatgtcgacactttgtc
ttttctcgtcattttaacgatgattgtaagcctgattgtgataagcgttgtgatgtatgt
gtgagtctaaaaactgtagaaaaaaaggttgaagcctttcactcaaattccctacgcaac
aataattttagaagtgctccagaggcgaaagcgaatagtaatgagctctatggtggaggt
cgcgaggggaataagcgtcattttgagtcctatgattctgatggtggggattctggacac
gattacgaaatagcagagaagagagcaaaaaaggatcgggaaattttgattaaaaaagaa
tttcgaaatcgaaagaaaggtaaaagcagtggtaaggatgattcaaaggaggatgaagcc
atccgctttgcaaaagtgaagggtgcagaattcacaaaaaacaaaattgctggccttgaa
gtacgagctagggagtcttatttgggtctattggaaacaaatatacggcttaattatgat
actgctattaagtatggagctctcaaggaggaggagaagaaattatccaaccaggatatt
cttcaaattgctgtgaatgaagagtatcaaatatttacatccaataaagtcgtgaccatg
taccgccgagggatggcatttcttatggcagctgtgaaaaaagacactgacggatggaat
gcacattcgtgtgtaattaaatatgatccttcggaaaacaatcaccaatctctttcaaaa
ttggcatctggtattaagaaggaagaaaagaaaaaaagttcagagacgacgtcgggaaat
gttcctaaaatcatttccaaaggaggctttaaaattaagagagatcctcttactcaagtt
ggaataacgaactatttttcaaaatccgaaccaaaagtgcagtccaagtggaagtctctt
ggccttgacgatgacgaggataatgatcagactaacaatcaaggagatgaagagatagag
gaaaatccttcgacatcctcttcaaatattaacttctacaatgaggccaacaatgatgat
aagaaaagtttctcttcggagtcacccatttcctacaaggcggcaccctctgaatcaagt
aaagtttcttctcctatagaagaagaaaaagaggaagaagtgacggaggaagcaacattc
atcgaacgagaaaaaagcgcttgctatgaggattcagaaaatcagactgttgaggatttc
aaagagcgacttgaaaaggagtattcgaactttgaagaggattatacaacaatcaataat
attcagtcatcctcaagaagagattctcccaagagtgatgttgttaatccagaaacattt
tcaaagcttgaagaaacgattagtaagctacagaaacaaatggctgaaagtgaagattca
attaattatgagttattaaatcatagtaatcaagaagaaggatctccttttaaacttgac
cagaatgagatagagacattaagcccggaagcaagcaataaaaaaagtagtaatagtggt
tcttcgtcttccatgagtagtagaaaacaccgtccaaagatcaaagtaaaggtagaggat
ataacaaagacaaagaaagagcggcgagggccctcgtcgtcgaggacctcttctgagagt
tcctccaagaatgctgataaaaagagcaaaaaggatgccgcaaacgaaatagtcaaagtc
cttgttcctcactacaaatccgggaaaattatgtcaaaagaagtttttaaatttgctgcc
agagagctcacccatgttttacttgatgctaaagtaaagtcctcctcctatggaaattat
gtatctaaattcttcaagagacattgtagtattgtctcaattgatgatgctaggactaaa
ataaatcattttaaatccaaaattatcgtttga
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