Lepeophtheirus salmonis (salmon louse): 121127450
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Entry
121127450 CDS
T08214
Name
(RefSeq) LOW QUALITY PROTEIN: sorting nexin-13
KO
K17925
sorting nexin-13
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lsm04990
]
121127450
Domain-containing proteins not elsewhere classified [BR:
lsm04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
121127450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Motif
Other DBs
NCBI-GeneID:
121127450
NCBI-ProteinID:
XP_071749161
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All DBs
Position
13:41950045..41955822
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AA seq
1025 aa
AA seq
DB search
MWILIVIFFFLISLGFSGVLGILLISLSAFIGIFLLLYLVSRFQRTKFYLNSWDSAFNPE
TRRSKKSDFVNMRISGHPDIDTILSEIIHFVFRDHIHSWHSQLTYSRAFSMSLSKTVSCL
LKSLSTQVQKVDWIPYLTTKLVDDVASHVRLFKKARRLMKKERCSDENNKLPDLETIFFD
AEATMEGNICRDLVCTIHQEENYFLQDIAELVLFLLLPPEDFGTSSFRMLTRELLVNVVF
KPTFDLISDPDFINQTIIRLYKNYTIKPDIFFSTIRYSESLEELQAVRENVVKEINYLRS
NDSKGEMDSSLKQQLSSLLYIRKNIDTRIHRLQSGSLESDSVGFLNVIDWKDKIGTGLNL
FDLPLEVIVKNNIALSYFIDYMSSLGCQSYLFFYLNVEGWKVSAEQRLQAIALQDLNSPS
NTNQDKDVVFENMRESAHSIYEEYLSEKSNPRLRIDDTIIKKLLFRIRTQPPDPEWFEET
QIAVYDKLRSDERFLESFKKTLGYVKLLAELDLLRDKVEDDEEEESEYLVYDSASLGSYN
DEFNETGYQSLSITSNQSDECHSRNSSPGGKSHKRVGSGSSIRIAKKNHSRNASQGSLSS
IGEYVMSSNNNNNCNNDVGKYSSTLSYNLRNNSHSSLCSSNESLQIVLSAEVLEYSIVKD
SGKTYAIYTVLVKSRNFKGEEEIWHVYRRYSDFYALHEKVSGAFPTLNKIKFPSKKTFGN
MEKKNLENRLTMLNHYIRELLLTENLQEFPGLLDLIRKFLDQAGYEKERMEASTNVTKVI
VNPIKNSVKSVSKTVTAVPSNLLNSVDTFMDGFTRALLQNKSDNFDAKVSASIDADTTDN
IPLRILLLFMDEVFDLQDRNQWLRRQIVTVLRQIIKSMFGDIVNRRIIDYFAQITSPGKI
AEYLLSLKDSFWPKGVPVASRAPRDESTKMRTRFAAKSALFSSLSDDLRRVIGSETSRTG
ILTLFDMIQHPILNKRLVFVAFEGILKTLFDEQNFSDLFYKLHSRSSRVKNELKNSQRMQ
INVRR
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgtggatcttgattgttatattttttttcttaatatccctgggcttctcgggggtactg
ggaattttactcatatcgctgagtgcattcattggcatttttcttctattatatctggtt
tctcgctttcaacggaccaagttctatttaaactcttgggactctgcttttaatcctgag
acacgtcgttcaaagaaaagtgactttgtcaatatgcgaattagtggtcatccagatatt
gatactattctgagtgagatcattcattttgttttccgtgatcatatccattcttggcat
tctcaattgacatattctagagccttttccatgtctctgagtaaaactgtgagctgtctc
ttgaaatccttatcaacacaagttcagaaagtggattggataccctatttgacaacaaag
ctagttgacgatgttgcttctcatgtgagattgtttaaaaaggctcgacgattaatgaaa
aaggaaagatgtagcgatgaaaataataaattacctgatttagagacaattttctttgat
gctgaagccacaatggaagggaatatttgtcgagatttagtatgcaccatacaccaagaa
gaaaattattttcttcaagatattgctgaattagttctttttttactcttacctcccgaa
gattttgggactagttccttcagaatgttaacaagggaattattggtcaacgtcgttttt
aagcccacttttgatttaatcagtgatcccgattttattaatcagacgataatccgtcta
tataaaaactatacaattaagcctgatatttttttctctaccattcgttactctgaaagt
cttgaagaactacaagctgttcgtgaaaatgttgtgaaagaaattaattatctccgttcg
aatgattcaaaaggagagatggactcatctcttaaacagcaattgagttctcttctttac
ataagaaaaaatattgacactcgtattcatcgccttcaatcaggtagccttgaatctgat
tctgttggatttttaaatgtcattgactggaaggataaaatcgggacaggtctgaatctg
tttgatttgccccttgaagtgatagtgaaaaacaacatagctttaagttattttatcgat
tacatgtcaagcttaggatgtcaatcctacttgtttttctacctcaatgtggaaggttgg
aaagtttctgctgagcaaagactacaggcaatagcactccaagatcttaactccccttcc
aataccaaccaggataaagatgtagtttttgaaaatatgagagaatcagctcattctata
tatgaagagtatttatcagaaaaatctaatcctcgtcttcgaattgatgatacgatcatt
aagaagttacttttcagaattagaacacagcctccagatcctgaatggtttgaagaaaca
caaattgcggtctatgacaaattaagaagcgatgaacgttttttagaatctttcaaaaaa
actttggggtatgtcaagttgttggccgagttggatttgctgagagataaagtcgaagat
gatgaggaagaagagtcagaatatcttgtatatgattctgccagtttaggatcttataac
gatgagttcaatgaaacgggttatcaatccctatccataacaagtaaccaatccgatgaa
tgtcacagtagaaattcatctcctgggggaaagtctcacaaaagagtgggaagtggtagt
agtattcgtattgccaagaaaaatcatagtcgaaatgcatcgcaagggagcttatcaagc
attggtgaatatgtcatgagctcaaataataacaacaactgtaataacgatgtaggaaag
tattccagtacactttcttacaaccttagaaacaacagtcattcttcattgtgcagtagt
aatgaaagtttacagattgtgctctctgcagaagtattggaatacagcattgttaaagat
tctggtaaaacatatgccatttacactgttttggtcaaaagccgaaactttaaaggagaa
gaagaaatatggcacgtgtataggagatattctgatttttatgcccttcatgaaaaagtc
tctggcgcatttcccactttaaataaaatcaaatttccttcaaaaaagacatttggtaat
atggaaaagaaaaatttagagaatcgtcttacaatgcttaatcattatattcgagaacta
ctccttactgaaaatcttcaagaatttccagggttacttgatctgatccgtaagttctta
gatcaagctgggtatgaaaaggaaagaatggaagcttctacgaatgtcacaaaagtgatt
gtcaatccaataaaaaactctgtcaaatctgtgtcgaaaacagtcactgctgtacctagt
aatttattaaactctgttgatacgtttatggatggttttactcgagctttactacaaaat
aaatccgataactttgatgcaaaagttagtgcttcaattgatgccgatactacagataat
atccctcttcgtattcttctcttgtttatggacgaggtatttgatttacaggaccgcaac
caatggctgagacgacaaattgtaactgtgttaagacaaatcataaaaagcatgtttgga
gatattgtaaatcgaagaatcattgactactttgctcaaattacttcccctgggaaaatt
gcagaatatttattatctttaaaggattcattttggccaaaaggagttcctgtagcatcc
agagcaccaagggatgaaagtacaaaaatgcgaactagattcgctgccaagtctgcacta
ttttcatctttgagcgatgatcttcgacgggttattgggtcagaaacttctcgtacaggg
attttaaccctctttgatatgattcagcaccccatattaaataaaagacttgtttttgtt
gcatttgaaggcatattaaaaaccttatttgatgaacaaaatttctcagacttattctat
aaacttcattctagatccagtcgcgtcaaaaatgaacttaaaaactctcagagaatgcaa
attaatgtcaggagatga
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