KEGG   Lepeophtheirus salmonis (salmon louse): 121127525
Entry
121127525         CDS       T08214                                 
Name
(RefSeq) nucleoporin NDC1
  KO
K14315  nucleoporin NDC1
Organism
lsm  Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:lsm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    121127525
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsm03019]
    121127525
Messenger RNA biogenesis [BR:lsm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     121127525
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 121127525
NCBI-ProteinID: XP_040578857
LinkDB
Position
13:complement(14916747..14918988)
AA seq 491 aa
MKDPQKITDCVGSEVLWWKWFSSLFWSLFFQFGGLFTLNSCLLYPSHWIYDGIIVLCLSG
ILSDYYEAFWGMPFARMRKAGSLILHGVGGSLLLWTYGQCYGVSDSFITFSGAYFGIWKW
YQVQIERESPYIFEFPWLQIPKKSLIRSEFPSLLKHSVIDVLSHLRFCVPLSIALFDRPE
SDWTSYLWSLAYLSLTSWLLNTLLLTTLEIQHLILNSYLTEPTSFSLHHLLPAMEPKHNI
PLLRHLACQDFALSANTSPSRRTTFFTLSQPGGHPYNWNSIRTQCEVAINDFTESLLKIT
NPKKESPPQIQSPQPISDLRMRRLVNPPVPKSTPALEKKVEKLPVAVPSRSVSKIVKDKI
TSLTAIPDAVRVRSVFAQHSETLMWIIEGLSSLIAHSVKEDRYGVVQKDLSNVLSLFFNL
QQVIERHKGMAVNARKNKSETKDSHIKNSLRNTLKKCLYRITIAYKDNISDIPGLSIEHQ
QKMKNFHAFME
NT seq 1476 nt   +upstreamnt  +downstreamnt
atgaaagatccccaaaaaataacggactgtgttggctctgaggtcttgtggtggaaatgg
ttttcctccttgttttggagtctgtttttccagtttggcggtctttttacattgaattcc
tgtctcttgtacccgagccattggatctacgatggaatcattgtgctctgtctgagtggg
attctaagtgactactatgaagccttttggggaatgccttttgcgagaatgaggaaagct
ggaagcttgattcttcacggagtgggcggttccctgctcttgtggacctatggacaatgt
tacggagtctctgattcattcattacattctcgggggcctacttcgggatttggaaatgg
taccaagtgcagattgagcgagaatccccctacatttttgaatttccatggttgcaaatc
ccgaaaaagtctctgatccgctccgaattcccttccctcctcaaacactcagtaattgac
gtcctttcacatcttcgcttctgtgttcccctctctattgctctgtttgatcgtcctgag
tcggattggacctcctacctctggtctcttgcatatctctccttaacatcttggctcctc
aacacgctcctcctcactacactagagattcagcacctcattctcaactcttacctcacg
gagcccacttcattctcgctccatcacctactccctgccatggaaccaaaacacaacatc
cctcttttacgacatctcgcatgccaagactttgctctctctgcgaatacatctcctagt
cgccgaaccacattcttcactctgagtcagcctgggggacatccttacaattggaacagt
atccgtactcaatgtgaagtagctatcaatgactttacagagtctttactcaaaattaca
aacccaaaaaaggagtcacctcctcagattcaatctcctcaacccatatccgatctaaga
atgagacgtttagtaaaccctcccgttcctaaatcaacacccgctttagagaaaaaggtt
gaaaaactgccggtcgccgtaccttctcgaagtgtatctaaaattgttaaggataaaata
acaagcttaactgctatccctgatgccgtacgtgtgcgtagtgtatttgctcaacattca
gagactcttatgtggatcattgaaggtttatcaagcttaatcgctcattcggtcaaagag
gatcgctatggcgttgttcagaaggatttgtcaaatgttttgagtttatttttcaacctt
caacaagtcattgagcgtcataagggtatggccgtgaatgcccgaaaaaacaagagtgaa
accaaggattctcatataaaaaatagccttcgaaacactcttaaaaaatgtttatatcgc
ataacaattgcttataaggataatatctcagatatccctggtctgtccatcgagcatcag
caaaaaatgaagaattttcacgcatttatggaataa

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