Lepeophtheirus salmonis (salmon louse): 121127552
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Entry
121127552 CDS
T08214
Symbol
Rabex-5
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04137
Mitophagy - animal
lsm04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
121127552 (Rabex-5)
04137 Mitophagy - animal
121127552 (Rabex-5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121127552 (Rabex-5)
Membrane trafficking [BR:
lsm04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
121127552 (Rabex-5)
Protein recycling
Other Rab GTPase associated proteins
121127552 (Rabex-5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
XRCC4_CC
HODM_asu-like
TNFSF4_N
Motif
Other DBs
NCBI-GeneID:
121127552
NCBI-ProteinID:
XP_040578897
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All DBs
Position
13:15225181..15231633
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AA seq
623 aa
AA seq
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MPNLESRDLLCRSGCGFYGNPEWKWFCSKCWREHNHVGLSPSKRSTSTTMGLLSKSESFS
KFEDKKKRQSSDRNLKHIFRKEKKKELQDISSPSKNFSKSPYSNVSKKDFDQNPESSPEV
TIVSQEFTAFLRTHVPRQGNADISRQIKSLIDPISKKADIIPIDDISNIVQDFYRRLQKR
LECHQLFRDLTEEERSTILEYSEKFVMTYFYKSLFCPNTSDDEEKDLEIQNRIRSLNWIS
TRDLKCSISETSQEVRDLLYKAINDILEMDGKYAPQDKMECLVRCCKTIFEMLKLSNSSP
ASADDFLPCLIYVCLKANPPRIQSNINFITKFCNENKLRMGEGGYFFANLCCALSFISTL
DANSVSMDKDEFDSYVSGRAMPPGSWQSSLLMCEGLQVMSQNLKTLSDLQVRHDKVQEEA
QKLQREMDDFQKVITEEVESVLKRTEYTIKVKNPALLVDENSPSTVLLPEPLEPTSIDKI
LSAPSPLEDFLVSSSGIENDSILTLDMGSLAPENASLLSFDVSDVDENHGASLIKELAEY
RGFSAQSFNIPSIPCDNAITAVEEEEECISHSTTATERSSGTSTDEEGKSIVPENGGASS
VSDNQEKLVKVFSGIFNTIDNLI
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatttggaatctcgggacttgctttgtcgctcaggatgtggcttttatggcaat
cccgaatggaagtggttctgctccaaatgttggagggagcacaaccatgtgggtctgtcc
ccttccaaaaggtcaacaagtacaacgatgggactgctgtctaaatccgagtccttttca
aagtttgaagataagaagaagcgacaaagcagtgataggaatctaaaacatatttttcgg
aaggagaagaaaaaggagttacaggatatctctagtccatcaaaaaatttctctaagtct
ccatattcgaatgtttcaaagaaagattttgatcagaatcccgaatcatcgcctgaagtt
accattgtgagtcaagaatttacggcctttttaagaactcacgtcccaagacaaggaaat
gctgacatatcgcgtcaaatcaaatccctgatagatcccatatcgaaaaaggcagatata
attcccattgatgatatatctaatattgttcaagatttttatcgacgacttcaaaaaaga
cttgaatgtcaccaattatttagagatttgacggaagaagaacgtagtacgattctcgag
tattcagaaaaatttgtgatgacctatttttacaagtctctattctgccctaataccagc
gatgacgaggaaaaagacttggaaattcaaaatagaattcgatccttaaattggatctct
accagagatttgaagtgtagcatttctgaaacttcccaagaagtaagggatcttttgtac
aaagctattaatgatattttggaaatggatgggaaatatgcgcctcaagacaaaatggaa
tgccttgtacgttgttgcaaaaccatttttgaaatgttgaagctgtcaaatagctctcct
gcttccgcggacgacttccttccctgcctcatttatgtttgtttaaaggctaatccacct
cgcatacagtctaatatcaactttataaccaaattttgtaatgaaaataagctaagaatg
ggtgaaggtggatatttttttgctaatttgtgctgcgcattatcatttattagtaccttg
gatgctaattcagtcagcatggacaaagatgagtttgatagctatgtgtcaggaagagca
atgcctccaggttcgtggcaaagttcccttcttatgtgtgaaggacttcaagtgatgtcc
cagaatcttaaaactttaagtgatctccaagttcgacacgataaggttcaagaagaagct
cagaagttacagcgtgaaatggatgattttcaaaaagttataacagaggaagtggagtcc
gtactcaaaaggactgaatataccataaaagttaaaaatcctgctttattagttgatgaa
aattcaccaagtactgttttactgcctgagcccttagagccaacatccattgacaaaata
ttaagtgcaccttccccattagaagactttttagttagtagttcagggattgaaaatgat
tctattttaactcttgatatgggttctcttgctccagagaacgcatcactgttatctttt
gatgtgtctgatgtggatgaaaatcacggagcaagtttgatcaaagagttagcagagtat
cgtggattttctgctcaaagttttaatatacccagtattccctgtgataacgcaattacc
gctgttgaagaagaagaagagtgcatcagccatagtacaactgcaactgaaagatccagt
ggcacttcaacggacgaagaaggcaaatctattgttcctgaaaatggtggggcttcctca
gtgtctgataatcaagaaaagctagtcaaagtttttagtggtattttcaataccattgat
aatctaatataa
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